Anas acuta (northern pintail): 137857534
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Entry
137857534 CDS
T11380
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu04510
Focal adhesion
aacu04517
IgSF CAM signaling
aacu04518
Integrin signaling
aacu04519
Cadherin signaling
aacu04520
Adherens junction
aacu04530
Tight junction
aacu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137857534 (ACTN1)
04518 Integrin signaling
137857534 (ACTN1)
04519 Cadherin signaling
137857534 (ACTN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137857534 (ACTN1)
04520 Adherens junction
137857534 (ACTN1)
04530 Tight junction
137857534 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
137857534 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aacu04131
]
137857534 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aacu04812
]
137857534 (ACTN1)
04147 Exosome [BR:
aacu04147
]
137857534 (ACTN1)
Membrane trafficking [BR:
aacu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
137857534 (ACTN1)
Cytoskeleton proteins [BR:
aacu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
137857534 (ACTN1)
Exosome [BR:
aacu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
137857534 (ACTN1)
Exosomal proteins of colorectal cancer cells
137857534 (ACTN1)
Exosomal proteins of bladder cancer cells
137857534 (ACTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Uds1
FAZ1_C
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
137857534
NCBI-ProteinID:
XP_068540279
LinkDB
All DBs
Position
5:37117361..37202479
Genome browser
AA seq
892 aa
AA seq
DB search
MDHYDPQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM
VSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI
NGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDAQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK
NYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGESDL
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggatcactacgacccgcagcagaccaacgactacatgcagccggaggaggactgggac
cgcgacctgctgctcgaccccgcctgggagaagcagcagcggaagacatttacagcatgg
tgtaattctcacctccgcaaggctgggacacagattgagaacatagaggaagatttcagg
gatggtcttaaactcatgttacttctggaagtcatttcaggtgaacgtttggctaagcct
gagagaggcaaaatgcgagtacacaaaatttccaacgtgaacaaggccttggatttcatt
gccagcaaaggagtcaaactagtatctattggagcagaagaaattgtggatggcaacgtt
aaaatgactcttggcatgatctggaccatcattcttcgttttgccattcaggatatctca
gttgaagagacatctgctaaagaaggacttttgttatggtgtcagaggaagacagccccc
tacaaaaatgttaacatccaaaacttccatatcagttggaaggatggccttggtttctgc
gctttaattcacagacaccgtccagagctcatcgactatgggaagctacgaaaggatgat
cctctcactaacctaaacacagcctttgatgtggctgagaaatacctggatatccccaag
atgctggatgccgaagacattgttggaactgcccgtcctgacgagaaagccatcatgacc
tatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagcaaat
cgtatctgcaaggtgctggcagtcaaccaagagaatgaacagctcatggaagactacgaa
aaactggccagtgatctgctggagtggatccgtcgcaccatcccctggctggagaaccgg
gcaccagagaacaccatgcaagccatgcagcagaaactggaggacttccgggactaccgc
cgcttgcacaagccccccaaagtccaagagaagtgccaacttgagatcaatttcaacacc
ttgcagaccaagctacggctcagcaacaggccagccttcatgccttcagaagggaaaatg
gtctcggatataaacaatgcctggggtggcctagagcaggctgagaagggctatgaggag
tggttgttgaatgagatccggaggctagagaggctggatcacctggcagagaagttccgg
cagaaggcatctattcacgagtcctggacagatggtaaggaagcaatgctgcagcagaag
gattacgaaactgcaaccctctcggagataaaggccctgctgaagaaacacgaggccttt
gagagcgacctggccgcacaccaggaccgcgtggaacagattgctgctattgcacaagag
ctcaatgagctggactattacgattctccaagtgtcaatgccaggtgccagaagatctgc
gatcagtgggataatctgggtgccctaacccagaaacgtagagaagctttggagaggaca
gagaagctactggaaacaattgaccagttgtacctggaatatgccaaacgagctgcccct
ttcaacaactggatggaaggggccatggaggacctgcaggacacgttcatcgttcacacc
attgaggagatccagggattgacaacagcccacgaacagttcaaagccactttgccagat
gctgacaaagagcgacaggccatcctgggaatccacaacgaagtctcaaagattgtccag
acataccacgtcaacatggcaggaacgaatccgtacactacaatcaccccacaggagatc
aatggcaaatgggaacatgtgaggcagctggttcctagaagggatcaagcgctgatggag
gaacacgctcgccaacagcaaaatgaacgacttcgtaagcagtttggtgcacaggccaat
gtcattggaccctggatccagaccaagatggaggagattggccgcatttcaatagagatg
cacgggaccctggaggaccagctcaaccacttgcggcagtatgagaagagcatcgtgaat
tacaaaccaaagattgaccagttggaaggagaccaccaacagatccaggaggcgcttatc
tttgacaacaagcacaccaactacaccatggagcatatccgagtgggctgggagcagcta
ttaacaacaattgctagaaccatcaatgaagtggaaaaccagattctgacccgtgatgcc
aaaggaatcagccaggaacagatgaacgagttccgggcttctttcaaccattttgacagg
gaccactccggcacacttggccctgaggaattcaaagcctgtctcatcagcttgggttac
gatattggaaacgatgcacagggagaggcagagtttgcccgcatcatgagcatcgtcgac
cctaatcgcctgggtgtagtgacgttccaggccttcatcgacttcatgtcccgggaaaca
gcagacacagacactgctgaccaggttatggcttccttcaagatcctggctggagataag
aactacatcactgtggacgaattacggcgggaactgcctcctgatcaggctgaatactgc
attgctagaatggcaccctacaacggccgcgatgccgtacccggtgccctggactacatg
tccttctccacagcgctctatggcgaaagtgacctttaa
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