Anas acuta (northern pintail): 137857724
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Entry
137857724 CDS
T11380
Symbol
PPFIA1
Name
(RefSeq) liprin-alpha-1 isoform X1
KO
K26226
liprin-alpha
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137857724 (PPFIA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aacu04131
]
137857724 (PPFIA1)
Membrane trafficking [BR:
aacu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
137857724 (PPFIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Rod_CreS
HWE_HK
Motif
Other DBs
NCBI-GeneID:
137857724
NCBI-ProteinID:
XP_068540691
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All DBs
Position
5:47887362..47945737
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AA seq
1231 aa
AA seq
DB search
MMCEVMPTISEAEIPSGGNGGHGSGSPLQSDADSHFEQLMVSMLEERDRLLETLRETQET
LTLTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGTTHKELMILKEQNNQKKTLPDGMLDINHEQENTPTTNGKRSSD
GSLCHDENLAKVIELQDIIDKQNKEQTQMKERLTSLSSRVAELEEDLDTARKDLIKSEEM
NTKLQRDVRETMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIATKDSMHRQS
EDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQME
AQLEEKNQELQRARQREKMNEEHNKRLSETVDKLLSESNERLQLHLKERMAALEDKNSLI
REIENAKKQIEELQHEKDQLVINVEALRAENDQVRLRATSLHHSRPDFRYPMTSSVADSH
TDSYGTSSVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDVDVSD
GEDDRETIFSSVDLLSPSGQADAQTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIES
RVGSGSLDAHGRFRSMSSIPPPYASGSLAGSSPPGSGRSTPRRIPHSPAREVDRLGIMTL
SPASREEVRDDKTTIKCETSPPSSPRSLRLDRVQKGALHTVSHEDIRDIRNSTGSQDGQA
SNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGQTNKETLGQVGMAEADSSSQD
ALGLSKLGGQAEKNRKMQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAAC
RANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTTGNVW
VTHEEMENLTATQQTEDEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDA
RMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERKREESQAEIKDVLVW
SNERMIRWVLSIGLKEYANNLVESGVHGALVALDETFDYNALALLLQIPTQNTQARAVLE
REFNNLLVMGTDRRLDEDDDKSFRRAPSWRKKFRPKDIRGLAAGSAETLPANFRVTTSMS
SPSMQPKKMQIDGSVSGTQRLDSATVRTYSC
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaggtgatgccaaccatcagtgaggcagagattccctctgggggaaatgga
ggccatggttcaggttccccattacagtcagatgctgattcccattttgaacagttaatg
gtatccatgttggaagaaagggatcgccttctggaaacactaagagaaactcaggagacg
ctaacactgacccagggcaaactacatgaagttggtcatgaaagagactccttgcagaga
cagctcaatactgcacttccacaggaatttgcagcgcttacaaaagaactaaatgtatgc
agggaacagctgcttgaaagggaggaagaaattgctgaactgaaagcagaaagaaataat
accaggctattactggaacatttggaatgtcttgtctccaggcatgagcgatctctcaga
atgactgttgtaaagagacaagctcagtctccagcaggagtttctagtgaagtagaagtt
ctcaaagcactaaaatctttatttgaacaccataaagcccttgatgaaaaggtaagggag
aggttacgagtagcacttgaacgatgtagcttattggaagaagaactaggtactacgcat
aaagagttaatgattttgaaagagcaaaataatcagaaaaaaacacttccagatgggatg
ctggatataaatcatgaacaagaaaatacaccaactacaaatgggaagagatcctctgat
ggttctttgtgccatgatgaaaacctcgctaaagtaattgaacttcaagacatcatagat
aagcaaaacaaagagcagacgcaaatgaaagaacgtcttacttctttgtctagtagagta
gcagagctggaagaagatcttgacacagctagaaaagacttaataaaatctgaagaaatg
aatacaaaattgcagagagatgtacgagagactatggcccaaaaggaagacatggaagag
agaatcacaactcttgagaaacgctacctcgccgcacaacgtgaagctacatctgtgcat
gacctcaatgataaacttgaaaatgaaatagccactaaagactccatgcatcgacagagt
gaagacaagaacaggcaattgcaagagcgactggagctagctgagcaaaagctgcagcag
accttgagaaaagctgaaactttgccagaagtagaagccgagctggcacaaagagttgca
gcactttcaaaggctgaagagaggcatggcaacatagaagaaagactgagacagatggaa
gcacagttagaagaaaagaatcaagaactgcaaagggctaggcagagagagaagatgaat
gaagagcataataaacgtttgtcagaaactgtggataagcttctctctgaatctaatgaa
aggcttcagcttcatctcaaggaaaggatggctgccttggaagataagaattcactcatt
cgagaaattgaaaacgcaaaaaaacaaatagaggaacttcagcatgaaaaggatcaactt
gtaataaatgtggaagcattaagggctgaaaatgaccaagtgcgactcagagccacatca
ctacatcatagccgaccagatttcagatacccgatgacatcatctgtggctgacagtcat
acagactcctatggcacctcctcagtgttgaggcgtccccagaaagggcgtttggcagct
ctcagagatgaaccttcaaaggttcaaactctgaatgagcaggactgggagcgagcccag
caagcaagcgtattggcaaatgtggcacaagcatttgaaagtgatgttgatgtgtctgat
ggtgaggatgacagggagactatattcagttcagtagatctgctgtcaccaagtggtcag
gctgatgctcagactttggccatgatgcttcaagaacagttggatgcaatcaacaaagag
attaggcttatacaagaagaaaaggaaaacacagaacagcgtgcagaggaaattgaaagc
agagtgggtagtggaagtttagatgcccatggcagattccggtccatgagctccattcct
ccgccctatgcaagcggttcacttgctggttcttccccacctggcagtggccgatccacg
ccaaggcgtattccacacagtccagctcgggaagtggacagactaggtatcatgacactg
tctccagcttctagagaagaggtacgagatgataaaactacaataaaatgtgaaacatcc
cctccttcttcacctcgatctttgcgtttggacagagtccaaaaaggagctttgcataca
gtgagccatgaagatatcagggacataagaaattcaacaggctcgcaagatgggcaagca
agtaatcctagtagcagcaatagtagccaagattcccttcataaggcccccaaaaagaag
gggatcaaatcctccattggacgcttgtttggtaagaaagaaaagggacgacctggacaa
acaaacaaggaaacattaggacaagttggcatggcagaagcagatagttcctctcaggat
gcattaggtctcagtaagcttggaggtcaggcagaaaaaaacaggaaaatgcagaaaaaa
catgagctgcttgaggaagccagaagacaaggcttaccttttgcacagtgggatggacct
acagtggttgtgtggttggagctgtgggtagggatgccagcctggtatgtggctgcttgc
cgagcaaatgtgaaaagtggtgctatcatgtcagccttgtctgatacggaaatacagcgt
gaaattggaattagtaatcctctgcacaggctgaagctgaggctggccattcaagagatc
atgtcactaacaagtccgtctgcccctcccacctcaaggacgaccacgggaaatgtctgg
gtaacacatgaagaaatggaaaatcttacagccacacaacaaacggaagatgaggaggga
agctgggctcagacgttagcatatggtgatatgaaccatgagtggattggcaatgaatgg
ctcccaagtctggggctccctcaatatcgcagctatttcatggaatgtcttgttgatgct
cgaatgctggatcatttaactaaaaaagatctacgtggacaacttaaaatggtggacagc
tttcacagaaacagttttcagtgtggaattatgtgcctacgaagactgaactatgatcga
aaagaacttgaaagaaaaagagaagaaagtcaagctgaaattaaagatgtccttgtctgg
agcaacgagagaatgattcgttgggtattgtccattggtcttaaggaatatgcgaataac
cttgtagagagtggagttcatggtgcacttgtggccttagatgaaacatttgattacaat
gcattagctctcttattacaaatacccactcagaacacacaggctcgtgctgttctggag
agggaatttaataatcttcttgttatgggcactgacagaagacttgatgaagatgatgat
aagagctttaggcgagcaccttcatggagaaagaagtttagaccaaaggacataagaggt
ttagctgctggatcagcagagactcttcctgcaaatttcagagttacaacctcaatgtct
tcaccctctatgcagccaaagaagatgcagattgatggcagtgtatcaggaacacaaaga
ttggattctgctacagtaaggacctactcctgttaa
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integrated database retrieval system
