Anas acuta (northern pintail): 137857901
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Entry
137857901 CDS
T11380
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137857901 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aacu03019
]
137857901 (CSTF3)
Messenger RNA biogenesis [BR:
aacu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
137857901 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
137857901
NCBI-ProteinID:
XP_068541178
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Position
5:complement(58525965..58575156)
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AA seq
718 aa
AA seq
DB search
MSGDGGAGEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFRRCKLPDTVDEAVRII
TGGLPEITVEGNGPVENNAMLNKGVKRPNEDSDDDEEKGSVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagacggaggcgccggcgagcaggctgccgaatatgtcccagaaaaagtgaag
aaagctgaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcaacctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttccccagttctggcagattctggaaactgtacattgaagcagagattaaagcaaaa
aattatgacaaagtggaaaagttatttcagcgatgccttatgaaggttttacacattgat
ttatggaaatgttacctttcctatgtacgagaaaccaaggggaagctacctagctacaaa
gaaaaaatggctcaggcatatgattttgctctggataagattggcatggaaatcatgtca
tatcagatctgggtggattacatcaattttttgaagggcgtagaagcagtaggatcttac
gctgaaaaccagaggataacagctgtccgtagggtttaccagcgtgggtgcgtgaatcca
atgattaacatagaacagctctggagagattataacaaatacgaagagggaatcaatatt
catttagctaagaagatgattgaagacaggagtagagattacatgaatgcacggcgtgta
gcaaaggaatatgagacagttatgaaaggcctggaccgcaatgctccttctgtcccccca
caaaataccccacaagaggctcagcaggtagacatgtggaagaaatacatccagtgggaa
aagagcaacccgctacgcacagaagatcaaactctcataacaaaaagagttatgtttgcc
tatgagcaatgccttttggttctgggacatcacccagatatctggtatgaagctgcacag
tatcttgagcaatctagtaagctgctagctgaaaaaggggacatgaacaatgccaaactt
ttcagtgatgaggctgctaatatttatgaaagagcgatcagcactttactaaagaagaat
atgcttctttattttgcatacgcagattatgaagagagtcgaatgaagtatgagaaagta
cacagcatatataatcgactcttggctattgaagatatcgatcccactctggtttatatc
caatatatgaaatttgcaaggcgagcagaaggcataaaatctggaagaatgatatttaag
aaagcaagagaagatgcccggacccgccaccatgtctatgttacagcagctttaatggag
tattattgtagtaaggataagtctgtggcctttaagatttttgagctggggctgaagaaa
tacggggacattccagaatatgtgctggcatatatcgactacctgtctcaccttaatgag
gacaataatacaagagttttgtttgaacgtgttttaacttcagggagcctcccacctgag
aaatctggagaaatctgggctcggtttttagcttttgaaagtaacattggtgatctagct
agtatactgaaagttgaaaaacgaaggtttacagcattcaaggaagaatatgagggtaaa
gaaacagccctgctcgtagacaggtataagttcatggacttatacccttgctctgcaagt
gaacttaaggctcttggttataaggatgtctctcgtgccaagctggcagctataattcca
gaccctgtggttgcaccgtccattgtgcctgttctcaaagatgaagtagacagaaagccc
gaatatccaaaaccagacactcaacaaatgattccattccagccaagacacttagcaccc
ccaggtttacatcctgtaccaggtggtgtatttcctgttccaccagcagctgtagtttta
atgaagctcctgccacctcctgtttgttttcagggtccctttgttcaagtggatgagctc
atggagatatttagaagatgcaaactgccagacaccgttgatgaagctgtgcgaataatt
actggaggcctacctgaaataactgtggaaggcaacggacctgtggaaaataatgctatg
ctcaacaagggtgtcaagagaccaaatgaagattctgacgacgatgaggagaaaggatcg
gtagttccccctgtacacgacatttacagagcacgacaacaaaagagaatccggtga
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