Anas acuta (northern pintail): 137858439
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Entry
137858439 CDS
T11380
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
137858439 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aacu03019
]
137858439 (DDX3X)
03041 Spliceosome [BR:
aacu03041
]
137858439 (DDX3X)
03036 Chromosome and associated proteins [BR:
aacu03036
]
137858439 (DDX3X)
Enzymes [BR:
aacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137858439 (DDX3X)
Messenger RNA biogenesis [BR:
aacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
137858439 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
137858439 (DDX3X)
Spliceosome [BR:
aacu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
137858439 (DDX3X)
Chromosome and associated proteins [BR:
aacu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
137858439 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
137858439
NCBI-ProteinID:
XP_068542279
LinkDB
All DBs
Position
1:complement(83690719..83707957)
Genome browser
AA seq
652 aa
AA seq
DB search
MSHVAVENALSLDQQFSGLDLNSSDSQSEGSSTSKGRYIPPHLRNREASKQGFDSGGWSS
SRDKDAYSSFGVRSDRGAKSSFFDRGNGSRGGRYEERGRGSDYDRSGFGRFDRGGNSRWS
DKSDEDDWSKPLPPSERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMG
EIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPG
DALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQ
QIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQD
TMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKR
SFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFR
SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER
NINITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGGSRGRSKSSRFSGGFGARDYRTSSG
SGSSSFSSSRSTSSRSGGSGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgccctcagtctagaccagcagttttctggtctagac
ttgaattcctcagactcccagagcgaaggaagctctacaagcaaaggcagatacattcct
cctcacttacggaacagggaagcttcaaaacagggttttgatagtggtggctggagttct
agcagagataaggatgcatacagcagctttggtgtacggtctgatcgtggagcaaaatca
agcttctttgaccgtggaaatggatcaagaggaggaagatatgaagagcgtggaagaggc
agcgactatgacaggagcggctttggtagatttgaccgtggtggaaacagccgctggtct
gacaaatccgatgaagatgactggtcaaagcctcttcccccaagtgaacgcctggaacag
gagctcttttcaggaagcaatactggcattaactttgagaagtatgatgacattcctgtt
gaagcaacaggcagcaactgtcctccacatattgaaagtttcagcgatgttgacatggga
gaaattattatgggaaacattgagcttacacgttacacccgtcctaccccagtccagaaa
catgcaatacctattattaaagagaagagagacttgatggcctgtgctcagacagggtct
gggaaaacggctgcgtttcttctaccaatattgagccagatctatgcagatggacctggt
gatgctttgagagctatgaaggagaatggaaggtatggacgccgtaaacaatacccaatc
tcgctggtcttggccccaactagagaactggctgtgcagatctatgaggaagccagaaag
tttgcataccgttccagagttcgtccctgtgttgtgtatggtggtgcagacatcggtcag
cagatacgtgacttagaacgtggatgtcacttgcttgtggcaactccaggacgactggtt
gacatgatggagaggggaaagattggactggatttttgcaaatacctagtgcttgatgaa
gccgacagaatgcttgatatgggttttgaacctcaaattcgtcgaattgttgaacaagat
actatgccaccgaaaggggtgcgtcataccatgatgttcagtgcgactttccccaaggaa
atccagatgcttgctcgtgacttcctcgatgaatatatctttctggctgttggcagagta
ggttctacatctgagaatatcacacagaaagtagtgtgggtggaagagtcagacaaacga
tcatttctgcttgacctgctaaatgccacaggcaaagattccttgactctggtgttcgtg
gaaactaaaaagggagcagatgctcttgaggacttcctctaccatgaaggatatgcctgt
acaagtatacacggagatcgctctcaaagagaccgagaggaagcactgcaccagttccgt
tcgggcaagagcccaattcttgttgccacagctgtagcagcaagaggactggacatatca
aatgtaaagcatgtcataaacttcgacttgccaagtgacattgaagaatacgtacatcgt
attggtcgtacaggccgtgtaggaaatcttggtctcgccacctcattcttcaatgagaga
aacataaacatcaccaaggacttacttgatcttcttgttgaggctaagcaggaagtaccg
tcttggctggaaaacatggcttatgaacagcatcacaaagggggtggcagccgcgggcga
tctaagagcagtagattcagtggaggatttggtgccagagattatcgaacaagtagtggt
tctggtagcagtagctttagcagcagtcgatcaaccagcagccgcagtggaggaagtggc
agcagaggatttggaggtggtggttatggaggcttctacaacagtgatggatatggaggc
aactataactcccagggggttgactggtggggcaactga
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