Anas acuta (northern pintail): 137859308
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Entry
137859308 CDS
T11380
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137859308 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aacu03019
]
137859308 (EXOSC1)
Messenger RNA biogenesis [BR:
aacu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
137859308 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
137859308 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137859308
NCBI-ProteinID:
XP_068544359
LinkDB
All DBs
Position
7:24055414..24056756
AA seq
195 aa
AA seq
DB search
MAAARRYCVPGERLCSAAEAAAGSGTYTRRGAVCAALAGCMRRGGGDGGGPQVAVLRDAE
AQLLPDVGAVVTCRVCSINSRFAKVQILYVGSTPLRSAFRGTIRREDIRATEKDKVEVYK
SFRPGDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPQTHTK
DFRKVARVQPQFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcggcggtactgcgtgccgggggagcggctgtgcagcgcggccgaggcg
gcggcgggcagcggcacctacacgcggcgcggggccgtgtgcgcggcgctggccggctgc
atgcggaggggcggcggggacggcggggggccgcaggtggcggtgctgagggacgccgag
gcgcagctgctgcccgatgtgggcgccgtggtcacctgcagggtgtgcagcatcaactcg
cgcttcgccaaggtgcagatcctctacgtgggctccacgccgctccgctccgccttccgc
ggcaccatccggagggaagatatccgagccaccgagaaggataaggtggaggtgtacaag
agtttccgccccggtgacatcgtcctggccaaggtgatctccctgggggacgcgcagtcc
aactacctgctgagcacggccgagaacgagctgggcgtggtggtggctcgcagcgaggca
ggggtgcagatggtgcccatcagctggtgcgagatgcagtgcccccagacgcacaccaag
gatttccgcaaggtggcccgcgtgcagccccagttcctgcagacctag
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