Anas acuta (northern pintail): 137859363
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Entry
137859363 CDS
T11380
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
aacu Anas acuta (northern pintail)
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aacu03009
]
137859363 (PDCD11)
Ribosome biogenesis [BR:
aacu03009
]
Eukaryotic type
90S particles
Other 90S particles
137859363 (PDCD11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137859363
NCBI-ProteinID:
XP_068544464
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Position
7:25417704..25441293
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AA seq
1840 aa
AA seq
DB search
MASIEENFPRGGIQKKPTEKKGKAPKPTTEQDNLFDVRHEEQSQKRKRNQEDLGKRKKFK
ADRKAGVKDNTMNIEPLTIEHLCEGMLLLGCIKEVSDFELVISLPNGLTGFVPVTQISDA
YSKMLSKQVAQGEVLEDLHSLLDMYSPGMLVRCIVTSVEKSADGRRSIKLSINPKNVNRG
LNASALTSGMLLSGFVSSAEDHGYLIDIGVNGTHAFLPRQKAQNYIKAVKRGPDLKIGQN
LNCVIEQVKNEGRIVRLSVDRSEVAASLATEQQNWTLSNLLPGLVVKAKVQKVDPLGISL
TFLSSFTGIVDFMHVDPDKSMNYSPNQVVKACILSVHPTSKVVRLTLRQSFLNPGGSPNQ
LSNDRIGAVVEESTVKAFYKQFGAIFELDDGTHAFARLKHLSKNRKSFKPAAFKAGCKHK
CRIIDYSLMDEMCILSLKYQVIGARFLQYQDIHTGDVVQGRVLALKPIGMQVKVTDGIKG
LVPSLHLADVILKQPEKKYNIGDEVKCRVLECNPAEKKLFLTLKKTLIQSKLPILSKYED
AEPGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELSAEPISCPDKVFQEGQVVKVMVLK
CEPEQERLLLSFKLSSTSAPEGKSEHTPKKKQEVKYQIGEMVDVKVLKKKENGLEVSILE
DEGNVIASLPTVYLSDFVANCKLLWHCLQEGDVLPRVMCLSDKGDRIILCRKSAVISAVQ
EEQVVRNFSEIQPGMLLTGYVRNVMHFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVV
GQTVIAKVMSTDEEKQRVLLNLKVSECSSGNPAAESFSLLNQYFKEVKEIRNLLKRRESG
IARSLCELMPGKELQLVVQDVKEDGSALFSGSCVKGLTVTATRYHLGDKSIAPGEKTKGL
VLHVDVLTSKVYVSLREELLKQRPKQQLKENSQHSAIVQHIAEEFAIVSLETGQLAAIPI
ASHFNDTFRFDSEKLKVGQTIYATLKMVKVNDHGVVLAVQDPAKKNVFVRVRKESETTLE
EMLAAAVTHSLSVGDIVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPIDSFPTHTL
KAGQKVTARVIGGRDVNTHRYLPITHPHFTRSIPELSIRPSEIEGKAETLKDGTHKKPEL
YNVGQTVTCFVKKYNVLKNWLEVEVSPDIRGRVPHLMLSPSTKVLKHPEKNFKNGQALSA
TVTGTGVPETNLFLSLIGIPSLQQGTITVGVIAKMIPHVGLTITLPGGKTGKVSIFHLSD
KYTENPLSDFKVGKVVRCYILANENGKIQLSLRQSRLNPRNSSKVEDPEIMSTKDVKKGQ
LVRGYVKSVTPSGVFFGLSASLQGRILFQNVSIYYVQKHSLYEKYLPEGKFLTAKVLGVN
KKENHVELSLLPEDTGMPSVLPESLGLPRYSAEEEKREEQKREEDKEKKEERKLKTKRRR
RSSEIEQEAKPKKRKVCPTDENDSGIEVYYREEEDGDQEEEAAENKSKIRKRSEAPRLQV
STGFTWDEDMKAVDMAVLNQKEESSESEDEEENPQSKPKKQTKKEKELEKQKKEKELCKL
EAALMDPSRQPQSADDFDRLVLSSPDSSILWLQYMAFHLQATEIEKARAVAERALKTICF
REEQEKLNVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYANSEKYKQAE
ELYHTMLRRFRQEKSVWLKYASFLLKQGQTEATHRLLERALKALPTKEHVDVISRFAQLE
FRFGDTEHAKALFDSTLNSYPKRTDIWSIYMDIMIKHGSQKEVRDIFEKVIHLNLAPKKM
KFFFKRYLDYEKKYGTEETILAVKTAALEYVEAKSSLADA
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatagaagaaaacttcccccgagggggcatccagaaaaaacccacagagaaa
aagggaaaagcacccaaaccaacgacagaacaggacaacttgtttgacgttcgccatgaa
gaacaatcccagaaaagaaaaaggaatcaggaggatctcggaaagcggaaaaagttcaag
gcagacagaaaagctggtgttaaagacaatactatgaatattgaaccactcacaattgag
cacctttgtgaggggatgctgctccttggttgtatcaaagaggtcagtgactttgagctc
gtcatcagcttgcccaatggacttacaggatttgtgccagtcacacagatcagcgatgcc
tacagcaaaatgctgagcaagcaggtggcccaaggggaagtcctggaggacttgcattct
ctcttggacatgtattctccagggatgctggtcagatgcattgtgaccagtgttgagaaa
agtgctgatggacgtcggagcatcaagttgtcaatcaaccccaaaaatgtcaataggggt
ctgaatgcttcagcactaacatcaggcatgctgctctctggctttgtgtctagtgcagaa
gaccatggctacctcattgatatcggagtcaatgggactcatgcttttctgcctcgtcag
aaagcccaaaattacatcaaagcagtcaagagagggcctgacttgaaaataggtcagaac
ctgaactgtgtcatcgagcaagtaaagaatgagggaagaattgtccgtttgtctgttgac
cgatcagaggttgctgcatcccttgcaacagagcaacagaactggacgctctctaattta
ctgccagggctggtggtgaaagctaaagtgcagaaggtagatccactggggatcagtctg
acctttctgtcttccttcactggcattgtggatttcatgcacgtggacccagataaatcc
atgaactattctccaaatcaagtggtgaaagcctgtatcctctctgttcaccccacctcc
aaggtggtgcggctcactctgcggcagtcgttcctcaatcctggaggatccccaaaccaa
ctctccaatgatcgcataggggcagtggtggaggagtcaacggtgaaggctttctacaag
cagtttggtgccatctttgagcttgatgatggcactcatgcatttgcacggttgaaacat
ctgtcgaaaaacaggaaatcctttaaacctgcagcatttaaggcaggatgtaaacataaa
tgtcgtatcattgactacagcctgatggacgagatgtgtattttatctctgaagtatcaa
gttattggagctcgttttctgcagtaccaggatattcacacaggggatgtggtgcagggc
agagtgttggctctgaaacctattgggatgcaggtgaaagtgactgatggaattaaaggg
cttgtgccatccttgcatcttgctgatgtaatcctgaagcagcctgagaagaagtacaac
ataggagatgaagtcaagtgtcgggtgctagagtgcaatcctgcagaaaagaagctattc
cttactctaaagaaaactcttattcaatcaaaacttccaatcctctccaaatatgaagat
gcagaaccaggtctgatcacacatggctttgtggtgtgcgcaagggagtttggctgcatt
gtgaagttctacaatgatgtcaaaggtctggtaccaaagaatgagttgagtgcggagccc
atatcttgtcctgataaagtcttccaggaaggccaggttgttaaagtaatggttttaaag
tgtgagcccgagcaggaaaggctcttgctgtccttcaagttgtcaagcacgtctgcacct
gagggcaaaagtgaacatactccaaagaagaaacaggaagtgaaatatcaaataggagag
atggttgatgtgaaagtcttgaagaagaaagagaatgggctagaggtttctatcctagaa
gacgaaggcaatgtgatagcctcgcttcccacagtgtacctctctgactttgttgctaac
tgcaagctcctgtggcattgtcttcaagagggagatgtcttgcccagagttatgtgccta
agtgacaagggggaccgtattatcttgtgcaggaagtctgcggtgatttctgctgtacag
gaggagcaagttgtgagaaatttctctgaaatccagcctgggatgctgttgactggttac
gtgaggaatgttatgcactttggagtgtttgtggagttcccttttggtgtgacaggactg
gcacccaaagtgagcatgagtgacaagtttgtgacagacaccaaggaccactttgtggtg
ggacagactgtgatcgcgaaggtgatgagcactgatgaggagaagcagcgtgtgctcctt
aatctgaaggtgtcagagtgcagctcaggcaatccagctgcagagagcttttccctactg
aatcaatatttcaaggaggtgaaggaaatcagaaacttattgaaaagaagagagtctggc
atagcccgaagcctttgtgaattgatgcccgggaaggagctgcagctggttgtgcaggat
gtgaaggaggatggctcagcactgttcagtggcagctgtgtgaaaggcttgactgtaaca
gccactcgctatcatttgggagataaaagtattgctcctggtgagaagacaaagggattg
gttcttcatgtggatgtcctcacatccaaggtttatgtttctcttcgagaagaactgtta
aagcaaagacccaagcaacaactcaaagagaactcccagcactctgccattgtgcagcac
atagcagaagagttcgccattgtgtctctggaaacaggccagctggcagctatccccata
gcctctcacttcaatgataccttccgctttgactcagaaaaactgaaggtgggacagaca
atctatgcaaccctaaaaatggtgaaggtgaatgaccatggagtcgtgttagcagtacaa
gacccggcaaagaagaatgtttttgtaagggtccggaaagaatccgagacaaccttagaa
gagatgcttgctgctgctgtgacacactctctttctgtgggggatattgtcactggtact
gttaaatccgtcaaaccaacccatgtcacagttgctattgatgacaagttgacaggttca
atccatgcatcccggattctggatgaagtgcccatagactcttttccaacacacactctg
aaagctggacagaaggtgactgcccgggtcattggaggcagagatgtgaatactcacagg
tatctgcccatcacccatccacacttcacacggtctattccggagctcagcattcgacca
agtgaaatagaagggaaagctgaaacattgaaagatggcacccacaagaaacctgaactc
tacaatgttggacagacagtcacctgttttgtgaagaagtacaatgtcctcaaaaattgg
ctggaggtagaagtctcccctgatattcgaggaagagtccctcatctgatgctgtctccg
agcaccaaggtcttaaaacatccagaaaagaacttcaaaaatggacaagccttgtctgct
acagtgactggaacgggtgtccctgagacaaacctcttcttgtcactcataggaattccg
tcactgcagcagggtaccatcactgtaggtgtgatagcaaagatgattcctcacgttggt
ttgaccatcacgcttccaggtgggaagactggcaaagtcagtatctttcacctgagtgat
aagtacacagagaatcctctgagtgacttcaaagttggcaaggttgtcaggtgttacatc
ctcgccaacgagaatggcaaaatccagttatctcttcggcaatccaggctaaacccaagg
aacagcagcaaagtggaggatcctgaaataatgtctactaaggatgttaaaaaaggccag
ctagtaagaggctacgtcaaatcagtcactccatcaggtgtattctttggcttgtctgca
tctcttcagggccgaatcctgttccagaatgtttccatttactatgtacagaaacactcc
ttatatgagaaatacctgcctgaaggaaagtttctcactgccaaggtccttggtgtaaat
aaaaaagaaaatcatgttgagctgtctctcctgcctgaagacactgggatgccaagtgtc
ttgcctgaatccctgggcttgccacgctatagtgcagaggaagagaaaagagaagaacag
aaaagagaagaagacaaggaaaaaaaagaagagcgtaaactgaagacaaaacggaggaga
aggagttctgaaattgagcaggaggcaaagccaaaaaaaaggaaggtctgtccaacagat
gaaaatgacagtggaattgaggtatattaccgggaagaggaggatggtgaccaggaggaa
gaggcagctgaaaataaatctaagataaggaaacgcagtgaagctcccaggctgcaggta
tccacaggcttcacctgggatgaggacatgaaagcggtggatatggctgtactgaatcag
aaggaagaaagctcggagagcgaggatgaggaggagaatccacagtcgaagccgaagaaa
caaacaaagaaggagaaagagctggagaagcagaaaaaggagaaagagctttgcaaatta
gaggcagctctgatggatcctagtcgtcagccccagtcagcagatgattttgaccgcctg
gtgctgagcagtcccgacagctccatcctctggctgcagtacatggctttccacctccag
gctactgagattgagaaggccagagctgtggcagagagagcgcttaaaacaatttgcttc
agggaagaacaagagaagctgaacgtctgggttgctctgctgaacttggagaacatgtat
ggtaccgaggagacactgatgaaggtctttgagagagctgttcaatacaatgagcctctg
aaagtcttccagcatttgtgtgacatctatgccaattctgagaagtacaagcaagcagaa
gaattgtaccacacaatgctgaggcgtttccgtcaggagaaatcagtgtggctgaaatac
gcctctttcctcctgaagcaaggccagactgaggctacacacaggcttttggagcgtgct
ctcaaggctctgcccactaaagaacatgtggatgttatttcaaggtttgcacaactggag
ttccgttttggggacacagaacatgccaaagccctcttcgatagcaccctcaacagctac
cccaagcggacagacatctggtctatctacatggacatcatgatcaaacatggcagccag
aaggaagtgcgggacatctttgagaaggtcatacacctgaacctggcaccaaagaagatg
aaattcttctttaaacgctacctggattatgagaagaaatatggcacagaagaaactatc
ttggctgttaaaacagctgcgctagaatatgtagaggcaaagagttcccttgctgacgcc
taa
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