Anas acuta (northern pintail): 137860542
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Entry
137860542 CDS
T11380
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
aacu Anas acuta (northern pintail)
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aacu03036
]
137860542 (MSH4)
Chromosome and associated proteins [BR:
aacu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
137860542 (MSH4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
Aq_aa27
nSTAND3
ATPase_2
nSTAND_NTPase5
AAA_30
DUF7068
Motif
Other DBs
NCBI-GeneID:
137860542
NCBI-ProteinID:
XP_068546987
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All DBs
Position
8:complement(21317..59003)
Genome browser
AA seq
997 aa
AA seq
DB search
MKAVVWLQLNLKLTLCLERRSPVCGTRRGSSTSRRRPGASGLGGWGMCACAGGPPLTPAF
DAILGECGGRGLVFGTEPPPAVPDPGGAAMSRGGSETNAYGRAVVSAASGSYTGRCSSTS
GLGGRVEEPPRYTLGLLQTPRSAADSTGDLSSGGAKPGSSSGAGLPASSSRVKLPVPGRG
GGVRCGVTIFIRVFIPIPFISVSSVCLLESSFGRSCTIESYLGDRSSCAENGSMLNFTSS
SAQGLNSTCIGKLPLSASRSVCRSRTPHMGYSVTSSSAVSAHTTASVIVAVVEGRGLARG
EVGMASIDLKNPEVILSQFADNTTYAKVITKLKILTPLEIIMPNTACDAGNTKLFGLITE
HFKVHFQGSEKTAMIDSSSAQNLELVTNNRDSRNGHTLFGVLNYTKTPGGSRRLRSNILE
PLVDVETINTRLDCVQELLQDEELFFGLQAVISKFLDTEQLLSALVQIPKQDTVKTAESK
ITNLIYLKHTLELVEPLKAALRSCNTPLLKAYYSSLEDRRFGIILEKITTVINDDTRYTK
GCLSMRTQKCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYNLPMKTSFSSARGF
FIQMNADCSTLPSGQLPSEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVC
KLLNEIYEHIHCLYKLSDIVSMLDMLLSFAHVCTVSDYVRPEFTDTLAIKQGWHPILEKI
AMEKPVSNNTYLTEGSNFLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAE
QIFTRIGMDDDIETNASTFMKEMKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAA
CEYLLNLKAFTLFATHFLELCHIDALYPNVENYHFEVQHVRSSAIKKEKIAYTYMLSKGY
TEEKNYGLKAAEVSSLPPSIILDAKEITNHIAKQILHQQESTPEMMKHRAVYHLAMRLVQ
TARNSRLDSDSLRIYLKGLKKKYKASCPAAERNDEQQ
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgttgtatggctgcaactaaacttaaaactgacgctttgtcttgaacggagg
agccccgtgtgcggcacgcgccggggatcatccacgtcccgccgtcgccctggcgcaagt
ggcctcgggggttgggggatgtgcgcatgcgcaggtgggccgcctttgacgccagccttc
gacgccattttgggagagtgtggtggccgcgggttggtcttcggcacggagcctcctccc
gcggtgcccgatccaggcggcgcggcgatgtcgagaggaggcagcgagacgaacgcgtat
gggcgggccgtcgtctcggcagcctcagggtcctatacgggccgctgctcttccacgtca
gggctgggcgggcgagtggaagagccgccccgctataccctgggcctgctgcagacgccg
cggagcgcggcggacagcaccggcgacttgtccagcggcggggcgaagccgggtagctcc
agcggcgcgggccttcctgccagtagtagcagggtgaagctgccggttcccgggagagga
ggtggggtgcggtgcggtgttactatctttatccgggtctttatccctattccgtttatt
tctgtgtcttctgtttgccttcttgagtcgagcttcggaagatcctgtacgatcgaatct
tatcttggtgacagaagttcttgtgcagaaaatggtagcatgttgaatttcacaagttct
tctgcgcaaggcctgaatagcacatgtataggaaaattacccctttctgctagtagatct
gtttgcagaagccgtacccctcatatgggatattcagttacatcctcatctgcagtctct
gctcataccactgcatcagttattgtagctgtagtagagggaagaggccttgccagaggt
gaagtaggaatggccagtattgacttaaaaaatcctgaggtgatattatcacagtttgca
gacaatacaacttatgccaaggttattactaaactcaagattttaacaccactggaaata
ataatgccaaacactgcttgtgatgcagggaacacaaaattgtttggtttgataacagaa
catttcaaggtgcatttccaagggagtgagaaaacagctatgatagattcatcatcagct
caaaatcttgaactagtaactaataatagagattctcggaatggtcacacactttttggt
gtcctaaattatactaaaactccaggtggaagtcgaagactcagatccaatatcctggag
ccactagttgatgtggaaacaattaacacaagactggattgtgttcaggaattactccag
gatgaggagctgttttttggtcttcaagcagttatctcaaaatttctggatacagaacaa
ctgctttcagctttggtacaaattccaaagcaggatacagttaaaactgctgaatcaaaa
ataactaacttaatttacctgaagcatactctagaacttgtggagcccctaaaagctgct
ttaagaagctgtaacacaccactgctaaaggcatattacagttctcttgaagatagaagg
tttggaattatacttgaaaagattacaactgtaattaatgatgatacaaggtacacaaaa
ggatgcctgagtatgaggacacaaaaatgctatgctgttaagccaaacatcaatgaattc
cttgacatagctcgtagaacatacacagaaattgttgatgacatagcaggtatgataaca
caacttgcagaaaagtacaacctaccaatgaaaacaagtttcagttctgctcgtggattt
tttatccagatgaatgctgattgttcaacactgcccagtggccaacttccttcagaattt
acaaagatcactaaaatgaaaaacacatatagcttcacttcagcagacttaataaaaatg
aatgagagatgtcaggagtccctgagagaaatatatcacatgacatacttaatcgtgtgt
aagctactgaacgagatctatgaacatattcattgcctatacaagctgtctgatattgtg
tcaatgctggacatgctgctttcatttgcccatgtctgcactgtttccgactatgttcgt
ccagaatttacggatactttagcgatcaaacagggatggcatcccattcttgaaaagata
gctatggaaaaacctgtatctaacaacacatacctgacagagggtagcaactttctcatt
attacaggaccaaatatgagtggaaaatcaacctatctaaaacagattgcgctctgtcaa
attatggcccagatcggttcttacgtcccagcagagtattgttcttttcgaattgcagag
caaatttttaccagaataggtatggatgatgatatagaaacaaatgcctcaacattcatg
aaggaaatgaaagagataacatacatcatacaaaacgctaatgacaaatcactcatcata
attgatgaacttggcagaggtaccagtgctgaagaaggtattggcatttgttatgctgcc
tgtgaatatctgttgaatttgaaggcatttacattgtttgctacacatttcctggaactg
tgtcatatagatgctttatatcccaatgtggaaaattaccattttgaagtgcaacatgtg
agaagcagtgctataaagaaggagaaaatcgcgtacacttacatgctctctaaaggatat
acagaggaaaagaactatggattaaaagctgcagaagtttcctctctaccaccatccata
attttggatgcaaaggaaatcacaaatcacattgcaaaacaaattttgcaccagcaggaa
agcactcctgagatgatgaaacacagagctgtatatcatttagcaatgagattggttcag
actgccagaaattcacgattagattcagacagtttgcgaatatatttgaaaggtttgaag
aaaaagtataaagccagttgtcctgcagctgaacgaaacgatgaacaacagtaa
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