KEGG   Anas acuta (northern pintail): 137860858
Entry
137860858         CDS       T11380                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
aacu  Anas acuta (northern pintail)
Pathway
aacu03030  DNA replication
aacu03410  Base excision repair
aacu03420  Nucleotide excision repair
aacu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aacu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    137860858 (RFC4)
   03410 Base excision repair
    137860858 (RFC4)
   03420 Nucleotide excision repair
    137860858 (RFC4)
   03430 Mismatch repair
    137860858 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aacu03032]
    137860858 (RFC4)
   03036 Chromosome and associated proteins [BR:aacu03036]
    137860858 (RFC4)
   03400 DNA repair and recombination proteins [BR:aacu03400]
    137860858 (RFC4)
DNA replication proteins [BR:aacu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    137860858 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    137860858 (RFC4)
Chromosome and associated proteins [BR:aacu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    137860858 (RFC4)
DNA repair and recombination proteins [BR:aacu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     137860858 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    137860858 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_assoc_2 AAA_lid_RFC1 Rad17 AAA_16 AAA_22 AAA_30 AAA_11 DUF815 SLFN-g3_helicase Mg_chelatase AAA_14 AAA_19 RuvB_N AAA_24 TIP49_C AAA_28 AAA_5 DNA_pol3_gamma3 DNAX_ATPase_lid AAA_7 ResIII Nsp2_AV
Other DBs
NCBI-GeneID: 137860858
NCBI-ProteinID: XP_068547710
LinkDB
Position
9:8845293..8856602
AA seq 362 aa
MQAFLKGPSAISTKPPAARDRGAAGSSGEGKKPRPVPWVEKYRPKNVDEVAFQDEVVAVL
KKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVIREK
VKAFAQLTASGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNY
ISRIIEPLTSRCSKFRFKPLSDKIQQQRLLDVSEKENVKISSEAVSYLVKVSEGDLRKAI
TFLQSATRLMGGKEITENIVTEIAGVIPKETMDGLLSACQSGSFERLETVAKNLINEGYA
VSQLVNQLHDIVVESDDFSDKQKSIIVEKLAEVDKCLADGADEYLQLMSLCALVMQQLTQ
NT
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcaggccttcctgaagggcccctccgccatcagcaccaagcccccggccgccagggac
aggggcgcggcggggagcagcggcgagggcaaaaagccccggcccgtgccctgggtggag
aaatatcgccccaagaacgtggatgaagtcgccttccaggatgaagtggtcgctgtgctg
aaaaagtccttggaaggcgccgatcttcccaatctgttgttctatggcccacctggaact
ggaaagacttccactattttagcagctgccagagaactctatggtcctgaattattccga
caaagagtccttgagttaaatgcctccgatgagcgtggaatacaagtgatccgggaaaaa
gtgaaggcttttgctcagctaacagcatctggaagtcgttcagatggcaagccttgtcct
ccttttaagattgtaatcctggatgaagcagactctatgacttcagcagctcaggcagcc
ttaagacgcacaatggaaaaagaatctaaaacaacacgtttctgccttatttgtaactac
atcagcagaataattgaacctttaacgtctcgatgctccaaattccgcttcaaacctttg
tcagacaaaatccagcagcagaggctattggacgtttctgagaaggaaaatgtgaaaatc
agtagtgaggcagtctcttaccttgttaaagtgtcagaaggggacttaagaaaagccatt
acttttcttcaaagtgccactcgcttaatgggagggaaggagatcacagagaacatagtc
actgaaatcgctggggtcatccctaaagaaacaatggatggactgctgtctgcctgccag
agtggttcatttgagagactggaaacagtggcaaagaacctcataaatgaagggtatgct
gtcagtcagcttgtaaaccagcttcatgatattgttgtggagagcgacgatttcagtgac
aagcagaaatctatcatagttgagaagcttgcagaagtggacaaatgcctggcagacggt
gctgatgaatacttgcagttgatgagtctctgtgcccttgtgatgcagcagctgacacag
aacacctaa

DBGET integrated database retrieval system