Anas acuta (northern pintail): 137863369
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Entry
137863369 CDS
T11380
Symbol
SIN3A
Name
(RefSeq) LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
137863369 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aacu03036
]
137863369 (SIN3A)
Chromosome and associated proteins [BR:
aacu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
137863369 (SIN3A)
REST complex
137863369 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
137863369 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137863369
NCBI-ProteinID:
XP_068552571
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Position
12:complement(12889377..12917113)
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AA seq
1279 aa
AA seq
DB search
MKRRLDEQESPVYASQQRRITSSTEAFQHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIAAVHSGHHHSTPVQPHGSQVVQSHTHPTPPAVPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPQHQSQPSAQSTPTPAQ
PAPQPPPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPHSNSLVAFVSXLLSKTTAEKVESVRNDHGGTVKKPQLNN
KQQRPNQNGCQIRRHSGTGTTPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKAL
RSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETYP
KERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSED
STFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLD
NTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFN
KVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTG
PHLSLAYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDV
EEEEEEEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYI
FMRLHQILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDID
VEDYYPAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSD
EICVQVTDLYLSENSNGATGGLLASQSSRTLLEATYQRRAEQLMSEENCFKLMFIQSRGQ
VQLTIELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIR
KCQRGREQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLR
AQQSHERVSKRLHQRFQAWVDKWTKEHVTREMAAETSKWLMGEGLEGLVPCTTSCDTETL
HFVSINKYRVKYGTIFKTP
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgcttggacgagcaggagtcacccgtgtacgcgtcgcagcagagacggatc
accagcagcaccgaggctttccagcaccagcaccgtgtgctcgccccggccccgccggtg
tatgaggcggtttcggagaccatgcagtctgccacggggatccagtactccgttaccccc
agctaccaggtgtcggctgtgccgcagagctcgggcagccacgggccggccatcgcggcg
gtgcacagcgggcaccaccacagcacgccggtgcagccccacggcagccaggtggtgcaa
agccacactcacccgacgccgccggccgtgcccgtgcaggggcagcagcagttccagagg
ctcaaggtggaggatgcattgtcttaccttgaccaggtgaagctgcagtttggtagccag
ccgcaggtctacaatgacttcttggatattatgaaggaattcaaatctcaaagcattgac
actccgggagtgatcagccgtgtatcacagctcttcaagggccacccagacttgatcatg
ggcttcaacaccttcttgccacctggttataagatcgaggtgcagacgaacgacatggtg
aacgtgacgacaccggggcaggttcaccagatccccactcatggcttgcagccccagccg
cagccccagccacagcatcagtctcagccttcagcgcaatcaaccccaacaccagcacag
cccgcgccgcagccaccgcctgccaaaatcagtaagccatcccaactgcaggcacatacc
cctgccagccagcagactcccccgattccaccgtatgcatcgccacgctcgccgccggtc
caacctcatacacctgtgacaatctctctgggaaccacaccatccctgcagaacaatcag
cccgttgagtttaatcacgccatcaactatgtcaacaagatcaagaatcggttccaggga
cagccagacatctacaaagccttcctggagatcctccacacctaccagaaggagcagcgg
aacgccaaggaggcaggaggcaactacacgcccgctctgacggagcaggaggtgtacgcg
caggtggctcgcctcttcaaaaaccaggaggatctgctctcagagttcgggcagttcctg
cctcactctaattctctcgtggcttttgtttcttagctgttaagtaagacaactgcagag
aaagtggaatcggtgagaaacgatcacggaggcaccgtgaagaagccccagctcaacaac
aagcagcagagacccaaccagaacggctgtcagatccgacggcactcaggaactggaaca
acccctccggtcaagaagaagccgaagctgcttggtttaaaagaccagtctttggcagaa
gccagcaagcatggcgtggggacagaatctctgttctttgagaaggtccgcaaagctcta
cgtagcacagaagcatatgaaaacttcctccgctgcctggtgattttcaaccaggaggtg
atctcccgggcagagcttgtgcagctcgtctctccctttctggggaaattcccagagttg
ttcacttggtttaaaaactttttggggtataaagagtctgttcacatggagacatatccg
aaggaacgggccacagaggggattgccatggagatagactacgcctcctgcaaaagactg
ggctccagctaccgcgccttgcccaagagctaccagcaacccaagtgcacggggcggacg
ccgctgtgtaaagaggttttgaacgacacctgggtctccttcccttcctggtctgaagac
tccacgtttgtgagctccaagaagacacaatacgaagagcacatctacaggtgtgaggat
gagcgctttgagctggatgttgtcttggagaccaacctggcaacaatccgcgtccttgag
gcaatccagaagaagctgtcacgcttgtctgccgaggagcaggccaaattccgactggac
aacaccctgggcggcacctcggaggtgatccaccgcaaggctctccagaggatatatgct
gacaaagcagccgacatcatcgatgggcttcggaagaacccctctgttgctgttcccatc
gtgctgaaaaggttaaagatgaaagaggaagagtggcgagaagcccagcgagggtttaat
aaagtctggcgggagcagaacgagaaatattacctgaaatccttggaccaccagggcatc
aacttcaagcagaacgataccaaggtcctgaggtcaaagagtctcctcaatgagattgaa
agcatctatgatgagaggcaagagcaggcctcggaagacaacgccggcgtacccacaggc
ccgcacctatcgttagcctacgaagacaagcagatcctggaggacgccgcctcgctcatc
atccaccacgtgaagcggcagacgggaatccagaaagaggacaagtacaaaatcaagcag
attatgtaccacttcattccagacctgctattcgctcagcgaggtgaactctccgatgtg
gaagaggaggaagaggaagaaatggacgtggacgaagctactggagctgcgaaaaagcac
aacggtgttgggggcagcccgcccaaaaccaagctgatgttcaacaacacaacggcccag
aagctgcggggcatggatgaggtctacaacctcttctacgtgaacagcaactggtacatt
ttcatgcggctgcatcagatcctgtgcttgcggctgctgaggatctgcacccaggccgag
cggcagatcgaagaggagacgcgggaaagggagtgggagagggaagtgctgggcataaag
cgagacaagagcgacagccctgccatccagctgcggctgaaggagcccatggacatcgac
gtggaggattactacccggccttcctggacatggtgcgcaatctgctggacgggaacatg
gactcgtcgcagtacgaggactccctgcgcgagatgttcaccatccacgcctacatcgcc
ttcaccatggacaagctgattcagagcatcgttcgacagctccagcacatagtgagcgac
gagatctgtgtgcaggtcacggacctctacctgtcggagaacagcaacggagccacggga
ggccttctcgcctcgcagtcctctcgtacccttctggaggccacctaccagcgcagagct
gagcagctcatgtcagaggagaactgcttcaagctgatgttcattcagagcagaggccaa
gttcagttaaccattgagctgctggacacggaagaggagaactcggatgacccagtagaa
gcagagcgctggtcggactacgtggagcggtacgtcaactccgattctacctcccccgag
ctccgggagcacctggcccagaaacctgtcttcctgccgaggaatctgaggcggatccgt
aagtgtcagcgtggtcgggagcagcaggagaaggaagggaaggagggaaacagtaagaag
tccatggagaacgtggagagcttggacaagctggagtgtaaattcaaactgaactcctat
aagatggtgtacgtgatcaaatcggaggattacatgtacaggaggaccgctctgctgcga
gctcagcagtcccacgaacgagtgagcaagcggctgcaccagcggttccaggcctgggtg
gacaaatggaccaaggagcacgtcacccgcgagatggcagccgagacgagcaagtggctc
atgggcgaagggctggagggcttggtgccctgcaccacctcctgtgacacagagaccctg
cactttgtgagcattaacaagtaccgtgtcaaatacggcacgatattcaagacaccgtaa
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