Anas acuta (northern pintail): 137863652
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Entry
137863652 CDS
T11380
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137863652 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aacu03019
]
137863652 (CSTF2)
Messenger RNA biogenesis [BR:
aacu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
137863652 (CSTF2)
U7-dependent histone pre-mRNA processing factors
137863652 (CSTF2)
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GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
137863652
NCBI-ProteinID:
XP_068553097
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Position
13:complement(15180612..15187295)
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AA seq
591 aa
AA seq
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MAGLAVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQPVPGPGPGPGPGPNAQLNPQNTPSSQPQPIGGMH
VNGAPPLMQPPMQGGVPAPGQMAAAVQGPGPGPMAPGGGLQPQVGIPGGGPVPLERGQGN
LQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVT
GEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRD
PRGLEPRGLEPRGLEPRVMEARGLEARGLEPRVLEPRVLEARAMEARVMEPRGLEPRGPG
PNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPG
QSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggcggtgcgggacccggccgtggaccgctccctgcgctccgtgttcgtg
gggaacatcccgtacgaggccaccgaggagcagctgaaggacatcttctccgaggtcggg
cccgtggtcagcttcaggttggtgtatgacagggagacaggaaagccgaagggctatggc
ttctgtgagtaccaggatcaggagacggccctcagcgccatgcggaacctcaatgggcga
gagttcagcgggagggccctgcgtgtcgacaacgcggccagcgagaagaacaaggaggag
ctgaagagcttgggcaccggtgcacccatcatagagtcaccgtatggggaccctgtcaat
cctgaagatgcccctgagtccatcagccgagcggttgccagcctgccacccgagcagatg
tttgagctgatgaagcagatgaagttgtgcgtccagaacagcccccaggaagccaggaac
atgctgctgcagaacccccagctggcttacgccctgctgcaggcccaggtggtaatgagg
atcgtcgacccggagatcgcactgaaaatcctgcatcgccagaccagtgttcctcctctg
atcccaggcaaccagcagccagtgccaggacctgggccgggaccagggccagggccgaat
gcccagctgaacccccagaataccccatcgtcccagcctcagcccataggtggcatgcac
gtcaacggcgctccccctctgatgcagccgcctatgcagggaggagtgccagcaccagga
cagatggcagctgctgtgcagggccctggccctggccccatggctccaggaggtgggctg
cagccacaggtcgggataccaggaggagggcctgtgcccttggagcgtggacaagggaac
cttcagctttcgcccgtgggacctgccaggcctgcgtctatcgaacgcgttcaagtgccc
atgccagatccgagggcccccatgcagcgtggacctctacctgctagtggcccgccgccg
cgaggccttttgggagatgccccgaatgaccctcgcggagggacgctgctctcagtcact
ggagaagtggagcccagaggttaccttgggccgccccaccaaggagcccctatgcaccac
atgccgggccacgacagccgtggccccccccatgagatgagggggggacccatgggagaa
ccccgaccactgatgggagagccgcgggggcccttgatggatgctcgagttggaagggat
ccccgagggctggagccgcgaggattggagccacgggggctggagccccgggtgatggag
gcgcgaggcctggaggcacgaggcctggaaccacgggtcctggagccacgagtgctggaa
gccagggccatggaggccagggtcatggagccccgtggcctggagcctcgcgggcctggt
cccaacccacgtggcccgatgcctggggggatccagggtcctggaccacttaacatggga
gccagtggcccacaggggccccgccaggttcctaacatggcaggggcaggcatgcaagga
ggaggcattcctggagcaggggtccagggagctggtcagccaggaggctttagtcctgga
cagagccaggtcaccccccaggatcatgagaaggcagccctgatcatgcaggttctgcag
ctgacagcagaccagatcgccatgttgcccccagagcagcggcaaagcatccttattcta
aaggagcaaatccagaaatccacgggggcaccctaa
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