Anas acuta (northern pintail): 137863724
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Entry
137863724 CDS
T11380
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
aacu Anas acuta (northern pintail)
Pathway
aacu04382
Cornified envelope formation
aacu04510
Focal adhesion
aacu04512
ECM-receptor interaction
aacu04518
Integrin signaling
aacu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137863724 (COL4A6)
04518 Integrin signaling
137863724 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137863724 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137863724 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137863724 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aacu04147
]
137863724 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
aacu00536
]
137863724 (COL4A6)
Exosome [BR:
aacu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137863724 (COL4A6)
Glycosaminoglycan binding proteins [BR:
aacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137863724 (COL4A6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
137863724
NCBI-ProteinID:
XP_068553208
LinkDB
All DBs
Position
13
Genome browser
AA seq
1694 aa
AA seq
DB search
MGCAGLLWVLLLLVCLGMEPASGGGKKSYTGPCGGRDCSAGCKCFPEKGARGRPGPIGIQ
GPIGAPGFTGPEGLLGAKGERGAVGPPGPPGHKGIKGSMGVPGFQGINGIPGHPGQSGPR
GLPGLDGCNGTIGSPGVPGTDGFPGIPGLPGRPGPKGLKGEPVFAQGSLKGMKGENGLPG
LDGISGPKGFPGPTGSAGPIGLPGLQGPVGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGP
PGPPPSTGILEFMGFPKGKQGEKGEPGLQGLPGEKGLPGLPGFGGVGEKGEKGVPGLPGG
RGLLGLDGSDGIPGRKGHPGVPGYPGLDGVEGTKGELGDIGPPGPPIVVDREGVVISGAP
GDPGNPGIPGPPGDEGGSGLPGLPGAPGFPGLERDGMGPGGSPGIPGVKGEMGEPGRATI
GLPGSPGRDGLPGLPGAPGLPGSSRPSFLPGAILDGRTGAPGEPGQRGLPGALGPKGFKG
EAGDCACDGGVTRPGVKGISGPQGPTGIPGVPGIKGISGDPGTVGAPGLRGPLASAGQQG
LPGLKGEKGDSSYATGRGARGDRGATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGALGF
PGEKGLPGLPGTKGHHGEAGSPGVGYPGPSGVRGPPGDPGLDGLPGQAGLPGPPGITLPC
IVPGVYGPPGIPGFPGLPGPKGSKGFPGIPGQPGLHGSKGQPGSPGIIGLQGEPGFPGPR
GEQGSQGLPGLDGTDGLPGKMGPSGLAGAKGAPGDVFGAESGAQGERGRPGLPGDKGFAG
DIGFPGPKGLDGRPGLLGIKGELGNPGYSGVPGLRGPPGPGGPFGIKGKPGPLGSVGLAG
APGLPGVKGLAGDVGPQGPAGMKGFPGLDGAPGSPGERGFLGPPGPFGHDGRPGFSGPKG
EKGSSGLLGFPGMPGLPGVPGVNGFKGAPGAAGGIGSPGVLGLQGQKGDRGDVGPPGLPV
LGPPQQALQFKGDKGDPGLAGLGGFPGPRGDKGIPGSRGQPGLPGPAGSASRERGFHGEP
GFPGPSGQPGLPGQKGARGIIGFPGMPGERGSDGITGPLGFPGPIGLPGPKGDQGEPLGV
PGSAGVKGERGDPGFPGERGREGLKGEAGFPGSTGVNGLKGGPGDVGQEGPAGIPGNAGL
RGIPGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGSPGTPGLSEVGLK
GPAGLPGVKGEEGSPGLGRGALGFPGPKGSSGDMGPPGPVGLPGLPGSPGVSLPSDIRGR
PGDAGHPGLDGSSGLPGPPGPRGPPGPASDQGDTGSPGFPGVLGLRGIKGDVGPTGPIGL
PGVSGFKGVRGEPGLMGMPGKDGPPGDPGYPGLKGEMGRRGLPGRPGAPGITPQPEEITA
PAGLPGLPGIDGVPGFDGDPGFQGPVGKPGTKGLPGRSGLKGRDGLPGSPGTVGDPGPVG
TPGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIGMNKLWDGYSLLY
VEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVD
SVQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQS
LVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVSAPPSETLKAGQL
RTRVSRCQVCMKNL
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcgctgggctgctgtgggtgctgctgctgcttgtctgcctgggcatggagccg
gcgagtgggggtggaaagaagtcttacaccgggccatgtgggggccgtgactgcagcgct
ggatgcaaatgttttccagagaagggcgcaaggggtcgaccaggaccgattgggattcaa
ggaccaataggcgctcctggatttactggtccagaaggtttgctgggagcaaaaggagag
agaggagcagtgggcccccccggaccacctggacacaaaggcatcaagggctcaatggga
gttccaggatttcaaggaatcaatgggatcccaggtcaccctggccagtctggacccaga
ggtctgcctggccttgatggctgcaatggtaccattgggagtcctggtgttcctggaaca
gatggatttcctggcattcctgggctgccgggtcgtcctggcccaaaaggtcttaaagga
gaacctgtttttgctcaaggcagccttaaagggatgaagggagaaaatggtcttcctgga
ctggacggaatttctggcccaaaaggttttccaggtccaacaggttctgcaggccctata
ggattaccaggtttgcaaggtccagtgggtccccccgggccaccaggtcccaaaggtaat
atgggattaggctttcaaggagagaaaggagaaaagggagatgtaggactgcctggccct
ccaggtcccccaccatccactggaatactagaattcatgggattccccaaagggaagcaa
ggagaaaagggtgagccaggccttcaaggattgccgggcgaaaaaggattgcctggcctg
ccgggctttggaggtgttggagaaaaaggagaaaaaggtgtgcctggcttgccaggtggc
aggggtcttctgggactggatggatctgatgggattccagggagaaagggtcatccaggt
gttcccggctatccaggactggatggagttgaaggcacaaagggtgaattaggtgacatc
ggtcccccaggccctcctatcgttgttgacagggaaggtgtagtcatttcaggtgcccca
ggtgaccctggaaacccaggaatacctggtcctccaggagatgaagggggcagtggtttg
ccaggccttccaggagctccagggtttccaggcctggagagagatggaatgggccctggg
gggtctccagggattccaggtgtgaagggcgaaatgggagaaccaggaagagcaacgatt
ggattaccaggcagtcctggtagagatggtttaccaggtctgccaggagcaccaggattg
cctggctcatcacgcccttcattcctcccgggcgcaatcctggatggaaggactggggcc
cctggggagcctggacagagagggcttccaggagctttgggtccaaagggtttcaaagga
gaggcaggtgattgtgcttgtgatggaggagttacgagacctggtgtaaaaggcatctca
ggtccacaaggtccaacgggaatccctggtgtgcctgggatcaagggcattagtggagac
ccaggcactgtgggcgcaccaggactgcgaggccctctggcttcagctggccagcaaggt
cttccaggccttaagggagaaaaaggagattcatcctatgcaacaggcagaggtgctcgt
ggggatcgtggtgcgacggcgcccagaggaccttcaggcatcccaggaactcctggcagg
gatggacttccaggtctgccaggcccgccaggccctccaggggatggtgcgctgggattc
ccaggtgaaaaaggactgccaggattacctggcaccaagggccatcacggagaggctggt
tctcctggcgttggatatccaggtcccagtggagttcgtggaccaccaggtgacccaggg
ctggatggccttccaggacaagcaggtcttccaggacccccaggtatcaccttgccctgc
atagtccctggagtgtatgggccccctgggattcccggcttcccaggattgccaggtccc
aaaggcagcaaaggctttcctggcattccagggcaacctggattacatgggtcaaaagga
cagccagggtctccaggaataattggcttgcaaggggaacctggcttccctggacctcga
ggagagcaagggtcccaaggacttccaggactggatgggacagatggtttgcctgggaag
atgggtccttcaggcttagctggagctaaaggagctcctggagatgtgtttggtgctgag
agtggagcccagggagagcgtggccgacctggactcccgggtgataaagggtttgcaggt
gatattggatttccaggaccaaaagggctggatgggagaccaggcctcctaggtattaaa
ggtgaactgggtaatccaggctattccggtgtccctggattgcgaggacctcctggccct
ggaggtccttttggcattaagggaaaaccaggaccgttgggatcggttggcctggcagga
gctccaggacttcctggagtcaaaggattggctggggatgtaggtcctcaaggccctgcc
ggaatgaaaggcttcccaggtcttgacggtgctccaggatctcctggggaaagaggattc
ttggggccacctgggccttttggtcacgatggacgtccaggtttctctgggccaaaaggt
gagaagggatcttctggcctgcttggtttccctggcatgccaggcctgcctggtgtccct
ggggtcaatgggtttaaaggagctcctggcgcagctggaggaatcggaagccctggagtt
ctgggactgcaaggtcaaaaaggtgacagaggcgatgtaggtccacctggtcttcctgtt
cttgggcctccacaacaggcactgcaattcaaaggagacaaaggagatcctggattagct
ggacttggaggattcccaggacctagaggtgataaaggaatcccgggaagccgtggacag
ccaggtcttcctggacctgctgggtcagcaagcagagagagaggttttcatggtgagcca
ggcttcccgggtccatctggacagcctgggctgccaggacagaagggtgcacgtggcatc
ataggatttccaggaatgccaggagagaggggttcagatggtatcacaggaccacttgga
ttcccaggacctattggcctccctggtccaaagggtgaccagggagagcctcttggcgtt
cctggcagtgctggagtgaaaggagagcgaggggacccgggcttcccaggggagagaggt
agagaagggctcaagggtgaagctggctttccaggaagcactggagtgaatgggctcaaa
ggtggcccaggagatgttggccaagaaggaccagcaggaattcctggaaatgctgggctg
agaggaatccctgggccaccagggcctccagggcagccgggatctgtcggattccctggg
gctcgtggaacagcaggacccaaagggtttcatggatttccaggtttaaatggtctgaat
ggcttgccaggcacaaaagggtctcctggaacaccaggtctgagtgaagttggactgaaa
ggccctgcaggtctcccgggtgtgaagggtgaagaaggttctccaggcttgggtagaggt
gctctaggatttccgggaccaaaaggctcatcaggagacatgggtcccccgggtcctgtg
ggactgccaggcttgccaggaagtcctggagtttctcttccttctgatatacgtgggagg
cctggggatgctggccacccaggacttgatgggagttcaggtcttccaggtcctccagga
ccacgagggccccctggcccagcttctgaccaaggtgacacaggcagtccaggtttccct
ggtgtgcttggcttgcgaggcattaagggcgatgtgggacccactggtccaatcgggctc
cctggagtgtctggattcaaaggtgtaagaggtgagcctggacttatggggatgccaggt
aaagacgggcctccaggggatcctggttaccctggcctgaaaggtgaaatgggccgtcga
ggtctccctggccgaccgggggctccaggtataaccccacagccagaagaaatcacagcc
cctgcaggcttacctggtctgccggggattgatggtgtgcctggctttgatggagatcct
gggttccaaggcccggttggaaaaccaggtacaaaaggtctgccaggcagatctggtttg
aaaggacgtgacggcttacctggatcgcctggcaccgttggggatccaggccctgtgggt
accccaggaccacagggatttgaaggtgtcgctggaaagccaggctcacttggtttgcca
ggaatgccaggtcggagcgtgggcgttgggtacaccttagtgaagcacagccagtcagac
caaatcccaccttgccccataggaatgaacaagctctgggatggctacagcttactgtac
gtggaggggcaggaaaaatcacacaaccaggatcttgggtttgccggctcctgtttgcct
cgcttcagcaccatgccttttatttactgcaacatcaacgaagtgtgctactacgccagc
cgcaacgacaagtcctactggctctccaccactgctcccatccccatgatgccagtggac
agcgtgcagatcccccagtacatcagccgctgctccgtctgtgaagcgccctcccaggct
gtggccgtgcacagccaggatatcaccatcccccagtgtccccttggttggcgcagcctc
tggataggatactccttcctcatgcacacagcagctggtgcagaaggtggaggtcagtcc
ctcgtctcacctggttcttgcctggaggatttccgcgctactccgttcattgaatgcaac
ggtgccagagggacgtgccattactttgcaaacaaatacagcttctggctcacgaccgtc
gaacagtcacagcagtttgtcagtgcccctccctcagaaaccctgaaagcaggacagctt
cgaacaagggtcagccgctgccaggtgtgcatgaagaacttgtaa
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