Acididesulfobacillus acetoxydans: DEACI_0892
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Entry
DEACI_0892 CDS
T07960
Name
(GenBank) HD/PDEase domain protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
aacx
Acididesulfobacillus acetoxydans
Brite
KEGG Orthology (KO) [BR:
aacx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aacx03019
]
DEACI_0892
Messenger RNA biogenesis [BR:
aacx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DEACI_0892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
HDOD
tRNA_anti-codon
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
CAA7600240
UniProt:
A0A8S0X3N2
LinkDB
All DBs
Position
1:968698..969636
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AA seq
312 aa
AA seq
DB search
MSMLKDCQAGEKFSGTVLVTEWKESPFRSKPGSFIVMTCQDSSGTLPAKLWETEARHFEW
LREKDVFHIEASVSEYRGALELSVGSMRPAEAEEIDLTQLLMSSPLAEEILERRLQALRR
TVRDESLSLLLNRILDHPEFGVLYRRAPAAVKIHQPYLRGLWEHSVAVTELALELAGSYS
EVNTDLLTVGALLHDVGKIFEYNFERAVSYTTEGRLLGHILMGVDLISREIAAIPHFPPD
VRTKLLHIIASHHGRYEWQSPRRPKSMEAIIIHYADALEAELWQFRRTKDENPDEEWSPY
VRPMERYLYLGK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttaaaggattgccaggccggagagaagttttcggggacggttctggtcacg
gagtggaaagaaagcccgtttcgttccaaacccggcagctttatcgtcatgacgtgtcag
gacagcagcggaactttgccggctaaactatgggagacggaggcccgccactttgagtgg
ctaagagagaaggatgtgtttcacatcgaggcttccgtcagcgagtaccggggggcgttg
gaattatccgtgggatccatgaggcccgccgaagccgaggaaatagacctgactcagctc
ttgatgagttctcccttagcggaggagatcttggagagacgtttgcaggcactgagaaga
acagttcgggatgagagcctgagtctcttgttaaaccgtattctcgatcatccggagttc
ggggtgttataccggcgggcgccagcagctgtgaagattcaccagccctatcttaggggg
ctttgggagcacagtgtggctgtgacggagttggccttggagctggcgggtagttacagc
gaagtcaataccgacttgctgaccgttggggcacttcttcatgatgtcggtaagattttc
gaatacaacttcgagcgtgcggtttcgtataccactgaaggccgcctcttgggccacatc
cttatgggagtcgatcttatcagccgggagatagcggcaattccccatttcccgccggat
gtccgtaccaagcttttgcatattatagccagccaccacggccgctatgaatggcaatcc
ccacggcgtccgaaatccatggaagcgatcattatccactatgcggatgcgctggaagcc
gaactttggcaattccggcgcacgaaagacgaaaatccagacgaagagtggtctccgtat
gtccggcctatggagcgttatctctatctgggcaaatag
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