Acididesulfobacillus acetoxydans: DEACI_2372
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Entry
DEACI_2372 CDS
T07960
Name
(GenBank) Alanine-tRNA ligase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aacx
Acididesulfobacillus acetoxydans
Pathway
aacx03410
Base excision repair
aacx03430
Mismatch repair
aacx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aacx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DEACI_2372
03430 Mismatch repair
DEACI_2372
03440 Homologous recombination
DEACI_2372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aacx03400
]
DEACI_2372
DNA repair and recombination proteins [BR:
aacx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DEACI_2372
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DEACI_2372
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DEACI_2372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CAA7601705
UniProt:
A0A8S0Y369
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All DBs
Position
1:2589641..2592310
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AA seq
889 aa
AA seq
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MRRTWSLPDAPGGTAQLVETLMISPAVAQILVQRGTVRVEDAVDFLRPTLFNLSSPFRFG
AMSPAVERLRSARQAGEKVLVYGDYDVDGVTSVALLYRVLKSLGFKGVVYIPHRLEEGYG
LHREAIDRAAAAGVSVIVTVDCGITAVEEVEYAGKLGLDVIITDHHEPAETLPAAKAVLN
PKLEEEGPFSDLAGVGVAFKLAQALLRTLRQDPPGQKLPTERELLDLVALGTIADVVPLV
GENRIIVQQGLSQMRESAHVGLTALLKECGLADKPLKAGQIAFMVAPRINAAGRMDSAKA
GLELLITANGERAAELARFLNRENQVRQETEKRILAEAVAQLEQGPLPRVIVLAASGWHP
GVVGIVASRLVDRYYRPVFLAAVEGEEAKGSARGIPGYHVLEELKTQASLLRHFGGHRQA
AGFSLAAENIGLLRAGLNRRAEFLPPQIFRETLMIDGKVSLEDLSEDLFEGLEQLAPFGC
GNPGPLLGAAEVPVTALAAVGKEGAHLKLRLGREGSWEGIAYRQGGRAAELQQAERIDLA
FSLDTNTFRGQSKLQLVIRDFESRALWQRRSTAGKEKSGAEEEKMTAGEEKSAASWPAAA
AQTIEAEATQAAAETAEAGVAQAEAAEATAVEAEIAAAAEATEAAAAEVAQRGPREPGGP
AVTRSRVEWLDWRGLNRAAWLSKAEGRRVAVWSHSRLRTLEDFSGNAKGSVVPAARGKSW
GPFWSGEIQGWESPDTLGVVAGLPETEEELGRALTVLASHGVRQIALAEFHDLTALKQKL
GYWERRELAEIYRELQRLGRAHNPFLWGVEGSLSALRIFEELGFLRCLGGTEPWLIEFLS
PVGKIDLRRSLRYYCAEKRWEKALILQRRWTETPLRALREEWMDMDKER
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgcgacggacctggtctttgcctgacgcgccggggggaacggcgcaactcgtggaaact
ctgatgatttccccagcggtggcgcaaattctggttcagcgcggaacggtgagggtagag
gatgcggtggatttcctgcgtccgaccctttttaatttgtcttcccctttccgtttcggg
gcgatgtctccggcggtggagcgtttacggagtgcccggcaggcgggggaaaaagtgttg
gtttacggggattacgatgtcgacggagttaccagtgtggccttactctacagggtgttg
aaaagcctgggcttcaaaggagtcgtctatattccgcataggcttgaagaggggtacggc
ttgcaccgggaagcgatcgaccgggccgcggcggcgggagtgagtgtcatcgtcacggtg
gattgcgggattacggcggttgaagaggtcgagtacgccgggaaattgggcctggacgtc
atcatcacggatcaccacgaaccggcggagaccctgcccgcggccaaggcagtgctgaat
cctaagctggaggaagaaggccccttctctgatttagcgggtgtcggcgtcgcctttaag
ttggctcaggctctgctccgcactctaaggcaggatccacccgggcaaaaattgccgacg
gagagagaattgcttgacctggtggctctggggaccatcgcggacgtggttcctttggta
ggagaaaatcggatcattgtgcagcaaggactttcgcagatgcgggaaagcgcccatgtc
ggactcacggctctgctgaaagaatgcggcttagctgacaaacccctgaaagccggtcag
attgccttcatggtcgcccccagaatcaacgccgcgggccgcatggacagcgccaaggcg
ggcttagagcttctgatcaccgccaatggggagagggccgcggaattggcccggttcctg
aaccgtgaaaaccaagtgcgccaggagacagagaagaggattttggccgaggccgtggcg
caactggagcagggccccctgccccgggtcatcgttttggcggcctcaggctggcacccc
ggggtggttgggatcgtggcttcccgcctggtcgatcgttattaccggccggtttttctg
gcggcggtggaaggagaggaggcaaaaggttcggcccggggaatacccgggtatcatgtt
ctcgaggaactgaagacccaggcaagccttttgcggcactttggcgggcatcgccaagcg
gccggcttttccctggccgcggagaacatcggccttttacgggcgggattaaaccggagg
gcagaatttcttcccccgcagattttcagggaaaccttgatgatcgacggtaaagtgtct
ttagaggacctgagcgaagacttgtttgaagggctggagcagctggctcctttcgggtgc
ggcaatcccggaccgctgctcggcgcagcggaggtgccggttacggccctggccgctgtg
ggcaaagagggggcccatttaaaactgcgcctgggccgcgaaggaagctgggaagggatc
gcctaccggcagggcgggcgggcggcagaactgcaacaggcggaacggatcgatctggcc
ttcagtttagacacgaatactttccggggacagagcaagctccagcttgtgattcgcgat
tttgagagccgggccctatggcagagacggtcgaccgcggggaaagagaagagtggcgcg
gaggaagagaaaatgaccgcgggagaggagaagagcgccgcatcttggcccgcggctgcg
gcgcagacgatagaggcggaagctacgcaagcagcggcggagacggcggaagcgggagta
gcgcaagcggaggcggcggaggcaacggcggtggaggcggaaatagcggcagcggcggag
gcgaccgaagcagcggcggcggaagttgcccagagggggccgcgggagccgggcgggccc
gcggtcacgcgttcgcgggttgaatggctggactggcgtggcttgaatcgtgccgcttgg
ctgtccaaggcggaggggagacgggtcgcagtttggtctcattcccggctccggaccttg
gaggatttttccgggaacgccaaggggagtgtcgtcccggcggcaagagggaagagctgg
gggccgttctggtccggagagattcagggctgggaatcgccggacacgttgggtgtggtt
gccggtctgccggaaacggaagaggagttgggcagggcgttgacagtcttagcctcccat
ggggtgcggcaaatcgctttggctgagtttcacgacctaacagccctcaaacaaaaattg
ggttattgggaacgccgggaattggcggagatttaccgggaactgcaaaggttgggccgg
gcgcacaatccctttctctggggtgtagaggggtccttgagtgccctaaggatatttgaa
gagcttggctttttgcgttgtctgggagggacggaaccgtggctgatagagtttttgtcc
cccgtcggaaaaattgatttgcggagatcattgcgctattattgtgcagagaaacgctgg
gaaaaggccctcatcctgcagcgccgctggacggaaaccccgctgcgggctctcagggag
gaatggatggatatggataaagaaaggtga
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