Acididesulfobacillus acetoxydans: DEACI_3170
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Entry
DEACI_3170 CDS
T07960
Name
(GenBank) Superfamilies 1 and 2 helicase C-terminal domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aacx
Acididesulfobacillus acetoxydans
Pathway
aacx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aacx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEACI_3170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aacx03019
]
DEACI_3170
03009 Ribosome biogenesis [BR:
aacx03009
]
DEACI_3170
Enzymes [BR:
aacx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DEACI_3170
Messenger RNA biogenesis [BR:
aacx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DEACI_3170
Ribosome biogenesis [BR:
aacx03009
]
Prokaryotic type
rRNA helicases
DEACI_3170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
CMS1
GrpE
Motif
Other DBs
NCBI-ProteinID:
CAA7602495
UniProt:
A0A8S0Y3W4
LinkDB
All DBs
Position
1:complement(3421105..3422700)
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AA seq
531 aa
AA seq
DB search
MMVERLQTFGEITLSKQVLQALSEMGFEEPSPIQKEALPLALNGVDLIGQAQTGTGKTAA
FGIPITEKVNPKFQAVQALVLTPTRELAVQVSEEIAKICKYRHIKPLPIYGGQSIDRQIR
ALRYGCQVVVGTPGRLLDHLNRGTLRLPYVKTVVLDEADEMLDMGFIEDIESILKEVSAE
DRQLMLFSATMPLEIRRLAQRYMREPHTITVSRDELTVPLIDQVFYETREKIKVDALCRI
IDTEDIGQGIIFCRTKRGVDELVAALEARGYFAEALHGDLSQQQRDRVMKRFRDGKTELL
VATDVAARGLDIDKVTHVINFDIPQDPEGYVHRIGRTGRAGRKGQAITLISPKEYRQLRL
IEQLIKTRIRRQELPSLSDISERQAENLKNQLIKLIQKNHLGAYRSIAGALLEEYDSMEV
AAAALKYAVEGPDAEQREEDDEISFGNTGAAAGMVRLFMNIGRVQQIRPQDIVRWIAEES
GVPGNIIGMINIYDKFTFVEVPEEYAQRVLGCMHQNMIKGRKVNVEPAKAR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatggttgaacggttacaaacttttggcgagattactcttagcaaacaggtgttgcag
gcattgtcggagatgggttttgaagaaccgtctccgatccagaaagaagcgctgcccctg
gctttaaacggggtggacctgattgggcaagctcagacaggtacgggtaagacggcggcc
tttggaattccgatcacggaaaaagtgaatcctaaatttcaggcggtgcaagccctggtt
ctgacaccgacccgggagctggctgtccaggtgtcggaagaaatcgcgaaaatctgcaag
tacaggcacattaagcccctgcctatctacggcggacagtctatcgatcggcagatccgg
gccctgcgttacggctgccaagtggtggtcggcactccggggcgtttgctggatcatttg
aaccgcggtactctgcggctgccctatgtcaagaccgtggtcctggatgaagcggacgag
atgcttgatatgggctttatcgaggatatcgaaagcattcttaaagaggtctcggctgag
gatcgccagctgatgttgttttcggctacgatgcccctggaaatccgtcgtttggcacaa
cgctacatgagggaacctcacaccattacggtcagccgggacgaattgacggtgccgctt
atcgatcaggtattctacgagacgcgggaaaagatcaaggtggacgccctctgccgcatc
atcgatacggaagatatcggccagggaattattttttgccggaccaagcggggtgtcgat
gaactggtagcggccctggaggcgagaggttattttgccgaggcgttacacggggatttg
agccaacagcagcgggatcgggtgatgaaacgtttccgggacgggaagaccgaactcctg
gtagcgacggacgtggcggcccgaggtctggatatcgataaggtgactcacgtcatcaac
ttcgatattccccaggacccggaaggctacgtgcacaggatcgggcgcaccgggagggcc
gggcgcaaaggtcaggcgatcactttgatttcgccgaaggaataccggcagctccggttg
atagagcagttgatcaagactcgcattcgccgacaggaactgccttccctgtcggacatc
agtgaaaggcaggccgagaacctgaaaaaccagctgattaaattgatccagaaaaaccat
ttgggtgcttaccgctccattgccggggccttgctggaggaatacgattcgatggaagtg
gcggccgcggccctcaagtatgccgtggaaggtccggatgcggaacagcgggaggaagat
gatgaaatctcctttggcaataccggagccgctgccggcatggtgcgcctgtttatgaac
atcgggcgtgtccagcagatcaggcctcaggatattgtgcgctggattgccgaggaaagt
ggggttccgggtaacatcatcggcatgattaatatttacgacaagttcacttttgttgaa
gtgccggaagaatatgcgcaaagagttctgggctgtatgcaccaaaatatgatcaaaggg
cgcaaggtgaacgtggaaccggctaaagccagataa
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