Acididesulfobacillus acetoxydans: DEACI_3197
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Entry
DEACI_3197 CDS
T07960
Name
(GenBank) Metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
aacx
Acididesulfobacillus acetoxydans
Pathway
aacx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aacx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEACI_3197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aacx03019
]
DEACI_3197
Messenger RNA biogenesis [BR:
aacx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DEACI_3197
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
CAA7602518
UniProt:
A0A8S0W4M4
LinkDB
All DBs
Position
1:complement(3453006..3454670)
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AA seq
554 aa
AA seq
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MPREHKLQIIPLGGLGEIGKNMTVIRYDNQMLLVDAGLAFPEDEMLGIDIVIPDYSYVIE
NKESLLGILVTHGHEDHIGALPYLLRDLDVPIFATRLTLGLIQSKLKESNLNNIKATVVQ
PRDVVKLGVFRVEFIRVNHSIPDAVGLAVHTPLGTVIHTGDFKLDHTPVSGETLDIHKFA
ELGDKGVLCLMSDSTNVERPGFTMSESRVGQTFDEAFRNAKERIILASFASNVHRIQQAI
TAAYKTNRKVAVVGRSMVNVVTIANELGYLDIPEDTLVDIEEVLSLPGSRACILTTGSQG
EPMSALTRMAMNDHRRVEIQPGDTVIISANPIPGNEKSVARTIDHLFKQGAYVIYEAISG
MHVSGHGSQEELKLMLNMTRPRYFIPVHGEYRMLIKHAELAEQLGMARENIFVAENGSIV
EFTRSGASLGGKVTAGKVLIDGLGVGDVGNIVLRDRKQLSQDGILIVVMTLSRSTGAILA
GPDVVTRGFVYVRESESMLEEAKEKVRQTMLRCRENKITEWAILKSQVRDALSRHFYEKT
RRRPMILPIIQEIE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
ttgccaagagaacacaaactgcaaattatccccctagggggcttgggggaaatcgggaaa
aacatgacagtcattcgctacgataatcagatgttgctggtggatgccgggctggctttt
cctgaagatgaaatgttggggattgatatcgtcatacccgactattcctatgtgattgag
aataaagagtccctgctgggtatcctggtcacacatggtcatgaagaccatatcggagct
ttgccctatttgctgcgggatctggacgtgccgatcttcgcgactcggttgacgctgggg
ttgattcaatccaaactcaaggagagcaatttaaacaacattaaggcgactgttgtgcag
ccacgggatgtggtcaaactcggagtgtttcgagtggaattcattcgggtcaaccatagt
attccggacgctgtcgggttggcggtccacacacccttggggacggtcatccacacgggg
gatttcaagctggaccatactccggtgtcgggcgagacgctggacattcacaagtttgcc
gaactcggagacaaaggtgtcttgtgcttgatgtctgacagtacgaatgtcgaacgcccg
ggtttcacgatgtccgaaagccgcgtagggcaaacgtttgacgaggcttttcgtaatgcc
aaggaaaggattattttagcgagctttgcgtcgaatgtgcatcgcatacagcaggcgatt
accgccgcctataagacaaaccgaaaagtcgcggtggtggggcggagcatggtgaacgta
gtaacgatcgccaatgagttaggatatttggatattcccgaggatacgctggttgatatc
gaggaagtgctcagtcttcccggcagcagggcctgtatcttgacgacgggaagccagggg
gaacctatgtccgctttgacgcggatggctatgaatgatcatcgccgggtcgagattcaa
ccgggtgacacggtgatcatttctgccaaccctattccggggaatgagaaatccgtcgcc
aggaccatagaccacttgtttaaacaaggggcatacgtgatttatgaggcgatatcaggc
atgcatgtctccggtcacggcagtcaggaagagctgaaactaatgcttaacatgacgagg
ccgcgctacttcattccggttcacggggaatatcggatgctcattaagcacgccgaattg
gctgagcagttgggaatggcccgtgagaacatttttgttgccgagaacgggagcatcgtc
gagtttacccgcagcggggcttccctgggcggcaaggttacagccgggaaagtgctgatt
gacggcctgggggtcggagacgtcggcaacatcgttttgagagaccgcaagcagttgtca
caagatggaattttgattgtcgtcatgaccttgagccggagcacgggcgccatcttggcg
ggacctgatgttgtaacgcgcggctttgtctacgtgcgtgaatcggaatcaatgctggaa
gaggccaaggaaaaggttcggcagaccatgctgaggtgcagagaaaacaagatcactgaa
tgggccatcctgaaaagccaggttcgggacgcactgagtcggcatttttacgaaaaaacc
aggcgccgtcccatgatcctgccaattatccaggagatcgagtga
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