Acididesulfobacillus acetoxydans: DEACI_3240
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Entry
DEACI_3240 CDS
T07960
Name
(GenBank) DNA topoisomerase 1 [topA]
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aacx
Acididesulfobacillus acetoxydans
Brite
KEGG Orthology (KO) [BR:
aacx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aacx03032
]
DEACI_3240
03400 DNA repair and recombination proteins [BR:
aacx03400
]
DEACI_3240
Enzymes [BR:
aacx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DEACI_3240
DNA replication proteins [BR:
aacx03032
]
Prokaryotic type
DNA Topoisomerases
DEACI_3240
DNA repair and recombination proteins [BR:
aacx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DEACI_3240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Ogr_Delta
Zn_ribbon_ISL3
DmmA-like_C
Zn_ribbon_RPB9
Zn_ribbon_GRF
HVO_2753_ZBP
Toprim_4
Zn_ribbon_PADR1
DZR
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
CAA7602561
UniProt:
A0A8S0X0G0
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Position
1:complement(3500152..3502254)
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AA seq
700 aa
AA seq
DB search
MSKTLVIVESPAKAKSIGKFLGSRYTVKASMGHLRDLPKSQLGVDIEHGFAPKYIAIRGK
GGLIKELRTAAKNADRVLLASDPDREGEAIAWHLGHLLGLNLDEKCRIEFHEITKQAIQT
SLKHVRAIDLHKVEAQQARRVLDRLVGYQLSPLLWRKVKKGLSAGRVQSVAVRLVGDREE
DIRAFVPEEYWTLTAFLEAKGGTFSAKLIKKSGEKLEIKSKEEMDAVLAELKALFFQVTD
VRKREKKKQPAPPFTTSSLQQEAYRKLNFSPKKTMLIAQQLYEGIELGAQGSDGLITYMR
TDSVRIAEAAQEEAKAYILAEHGSEYYPPEARRFVTKGRAQEAHEAIRPTSVLRTPEQMK
EFLSRDQLRLYRLVWERFLASQMSAALLDTLTVDVAAGSYLFRANTSTVRFPGYLAVYQE
SRDEEDKTDEDEGALAVPVVSGETVALARLEEKQHFTEPPPRYTEATLVRKMEEEGIGRP
STYAPTIETIQTRGYVVKEGKHLSPTELGEIVLNLLKEFFTDIVNIEFTAKFEEQLDDVE
EGEVSWRQVIDAFYAPFARTLEEAEEKIGKVQLEEQVTDEVCEHCGRRMVVRMGRYGKFL
ACPGFPECKNTKALLEETGAHCPRCGKALVVRRSKKGRKFYGCSGYPDCDFVTWDLPAPE
PCPECGQLMVVKTSRRQKRYVCTNPECRYAKVVQEMENAN
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagactttggtcattgttgagtctcccgccaaagcaaagtccatcggcaaattc
ctgggaagccgttataccgttaaagcatcgatgggccatctgcgtgatcttcccaagagt
cagctcggagtagacatcgagcatggcttcgcgccgaagtacattgcgattcgcggcaag
ggaggactcattaaagaattgcgaaccgcggccaaaaatgccgaccgagtgcttctggcc
tccgacccggaccgggaaggcgaagccatcgcctggcatctggggcaccttttggggctc
aatttggatgaaaaatgccgcattgagtttcacgaaatcacgaaacaggcgattcagacg
tctttgaaacatgtgcgggcgattgacctgcataaagtggaagcccaacaggcgcgtcgg
gtgcttgaccgcctggtcggctatcagctgagtccgttgctctggagaaaagtgaaaaag
gggcttagtgccggccgggttcaatcagtggcggtgcgtttagtgggtgatcgggaagag
gatatccgcgctttcgttccggaggagtattggactttgaccgcctttttagaggctaag
ggcgggactttttccgctaaactgatcaagaagtccggcgaaaaactcgaaatcaagtcc
aaagaagagatggacgcggtcctggcggagttgaaagctcttttctttcaggtgacggac
gtacgcaagagggagaagaagaagcagccggcgcctccgtttacgaccagcagcctgcag
caggaagcgtaccgcaaactgaatttctcccctaagaagacgatgttgatcgcccagcag
ctgtatgagggaatcgaattgggggcccaagggagtgacgggctcatcacttatatgagg
acggattccgtgcgcattgcggaggcggctcaggaggaagcgaaagcctatatcctggcc
gaacacgggtcggagtactatccaccggaagcccgccggtttgtgactaaagggcgggct
caggaagcgcatgaagccattcgccccacctccgtgctgagaacgcctgaacaaatgaag
gaatttttgagcagggatcaactgcgcctctaccgtttggtctgggaacgtttcctggcc
agccagatgagtgcggctctgttggatactttgacggtcgatgtagcggcaggcagctat
ctttttcgagccaatacctcgacagtgcgttttccaggctacttggcggtttatcaggaa
agccgggatgaagaagataaaactgacgaagacgagggcgccctggcggttccggtcgtg
tcgggggaaacggtcgccttggctcgtttggaggaaaagcagcattttaccgaaccgccc
ccgcgctacacggaagcgactttggtgcggaaaatggaggaagagggcatcgggcggccg
agtacgtatgctcccacgatcgagacgattcagacccgcggttatgtcgtgaaggaaggg
aaacacctttcccccacggaattgggcgagatcgtgctcaatcttctgaaagagtttttc
acggacatcgtcaacatcgaatttaccgccaagtttgaagaacagctggatgatgttgaa
gaaggagaagtctcttggcggcaagtgatcgatgctttctacgccccatttgcccggacc
ctggaggaagcggaggaaaaaatcggcaaagtccaactcgaagaacaggtgaccgatgaa
gtttgtgaacactgcggccgcagaatggtcgtacgcatggggcgttacggcaaatttctc
gcttgtccggggttcccggagtgcaagaacacgaaagccctcttagaagagaccggagcc
cactgtccgcgctgtgggaaagcgctggtggtccggcgttcgaaaaaagggcgtaaattt
tacgggtgcagcggctacccggactgcgattttgtgacttgggacctgccggcgccggaa
ccctgtccggaatgcggccaactcatggtcgttaagacttcccggcgtcagaagcgctat
gtctgcacaaatccggagtgccgttatgccaaggtcgtgcaggaaatggaaaatgccaat
tga
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