Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_0005
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Entry
TC41_0005 CDS
T01821
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TC41_0005 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_0005 (recF)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TC41_0005 (recF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
DUF2813
AAA_27
CTD7
Motif
Other DBs
NCBI-ProteinID:
AEJ41987
UniProt:
F8IHM0
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Position
2962..4077
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AA seq
371 aa
AA seq
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MDIRRVELHDFRNYAKAEIELSPGVNVLVGENGQGKTNALEAMLLIAVGKSHRAHRDRDL
IRWEQDRARILLEVSTRYGDRRLMLELGPEGRRAFANGVQVGRMTEFVGQVQVVLFAPED
LDLVKGSPRVRRRFLDTELGQLEPLYLHHLSLYNRALLQRNRWLKTASLSPDDDVLATFD
HQIAFHGAHVIHRRLRFLARLRTYAARIYSDIASGREEFALSYRSSVSGVEEDMGVEDMT
EILQRALQKNRAQDLRLGTTSVGPHRDDVLLFLDGREVHTAASQGQQRTIALSLRLAEID
FMREELGEYPVLLLDDVLSELDDLRQRNLVLGMSRKVQTVITTTSLNRLGQELDDFRLFR
VCSGIIAEERV
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggacatccggcgcgttgaactccacgactttcgcaactatgcgaaggccgagatcgaa
ttgtcgccaggggtgaacgtgctcgtcggcgagaacggccagggaaagacgaacgcgttg
gaagccatgctgctcatcgctgtgggcaagtcacacagggcgcatcgggatcgcgacctc
atccgctgggaacaggaccgcgcgcgtatcctgttggaggtctcgacgcggtacggagac
cggcgcctgatgctggaactggggccggaggggcgcagggcgttcgccaatggcgttcag
gtggggcggatgaccgagtttgtcggccaagtgcaggtggtgctcttcgcgccggaggat
ctcgatctcgtgaagggtagtccgcgcgtccggcgcaggtttctcgacacggaacttggg
cagctggagcccttgtaccttcaccacctgagcctctacaatcgcgcgcttttgcagcga
aaccgttggctgaagaccgcttcgctgtccccggacgacgacgtgctcgccacgttcgac
catcagattgcgtttcatggtgcgcatgtgattcaccggcgcctacggtttctcgcgcgg
ttgcgcacatacgccgcccgcatctacagcgacatcgcgagcggccgggaggagtttgcg
ctctcgtaccgaagttccgtttccggcgtcgaggaagacatgggcgtcgaagacatgaca
gaaatcttacagcgcgcgctccagaaaaaccgggcgcaggatctgcgcttgggcaccacg
agcgtcggtcctcaccgggacgacgtgctgctctttctcgacggccgagaagtccacacg
gcggccagtcagggacagcagcggaccatagcgttgtcgcttcggctcgccgagatcgac
ttcatgcgcgaggagctcggcgagtatcccgtgttgttgctggatgacgtcctgtccgaa
ctcgacgatctccgccagcgcaacctcgtactgggcatgagccgcaaggtgcagacggtc
atcaccacgaccagcctcaatcggctgggccaggagctggacgatttccggctgttccga
gtttgttctggtataatagccgaagaacgcgtctga
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