Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_0103
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Entry
TC41_0103 CDS
T01821
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03420
Nucleotide excision repair
aad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TC41_0103
03430 Mismatch repair
TC41_0103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_0103
Enzymes [BR:
aad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TC41_0103
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TC41_0103
MMR (mismatch excision repair)
Other MMR factors
TC41_0103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
AAA_16
SLFN-g3_helicase
Catalase_C
DEAD
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AEJ42081
UniProt:
F8IIC2
LinkDB
All DBs
Position
111299..113656
Genome browser
AA seq
785 aa
AA seq
DB search
MEGQPSAQHPAWRAEQAYVDRVVAAMRAKLAELEGVLRGVRGEIVEFRRHFWDDVTINLS
TLDDLVETHFAIRQQAEVLGERERRHQQAAQTKRTLERQISSPFFARIDFQYEGESEAEP
IYIGIASFRDERDHTFLVHDWRAPISSVYYDALPGPASFKAPAGIVRGELKLKRQFVIRG
GTILAMFDAGLTIGDELLMYALSRRSDAQMHNIVATIQRQQNVVIRDDESPALLVTGAAG
SGKTSAALQRAAYLLYKHRGDLDARQMLFFSPNPLFMSYVSNVLPELGEDNIEQATFYDY
LCARLQDEFVVEDPFDQMERLLEAGEDSRMARAVRYKASKAFADEMDRYVAGLAPRMRFH
PILVEGRVIATATDVKAAFDRTDPRLRLPLRVDLVKDELLHRLRQFERDEALSDWVQKAV
DGLPDEAYRRAERTAAKRKRERPELDEQEEARRLLGREVLRRMLRPVRHFVETLRFVDTA
GMYRAWFEQAASNPPEGFHPDDWAQICRQTVREMDEGTLWYEDATPYLYMKEQILGRAVS
APIRHVLVDEVQDYSVLQLRLIRSLFPYSRITMLGDPEQLVSPHLPGILEEDEMARLFPG
LVRVAFGQSYRSTKQIVLFTRGMAQKGAEIQPFDRDGALPQLAEVSGEAQQAGVIARWLG
EFADAGYQTTAVLTKTQAEAERLAKALERLGVKLRRLDKRAVSLEPGVVVAPVYLAKGVE
FDGVIVANASREQYQTAFDRQLLYTACTRAMHDLRMVSVGEASPWVLSQPAETYERVDAA
EVNAT
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggaaggacaaccctcagcgcaacacccagcatggcgggcggaacaagcctacgtcgat
cgcgtcgtggccgccatgcgcgccaagctcgcggagcttgaaggcgtcttgcgcggcgtg
cgcggcgagatcgtcgaatttcgccggcacttctgggacgatgtcaccatcaacctgagc
accttggacgatctcgtcgaaacccactttgccatccgccagcaggcggaggtcctcggc
gagcgggagcggcgtcaccaacaggcggcgcagaccaagcgcaccctggagcgccagatt
tcgtcgccgtttttcgcgcgaattgacttccaatacgaaggcgaaagcgaggccgagccc
atctacatcggaatcgcgtcgtttcgcgatgagcgagatcataccttcctcgtgcacgac
tggcgcgcgcccatctcgagcgtgtactacgacgcactgccggggccggcgtcgttcaag
gcgccggccgggatagtgcggggcgagctcaagctcaagcgccaattcgtcatccgcggc
ggcaccatcttggccatgtttgatgcagggctgaccatcggggacgagctcctcatgtac
gccctgtcgcgccgctccgatgcgcagatgcacaacatcgtcgcgaccatccagcgccaa
cagaatgtcgtcatccgcgacgacgagtcgccggcgctccttgtcaccggcgcggccggc
agcggcaagacgtcggccgctctccagcgcgccgcgtatcttttgtacaagcaccggggc
gatctcgacgcgcgccagatgctctttttctcgccgaatccgcttttcatgtcgtacgtc
tcgaacgtgctgcccgagctcggcgaggacaacatcgaacaggcgacattctacgactat
ctctgcgccaggcttcaggacgagttcgtcgtcgaagatcccttcgatcaaatggagcgc
ctgctcgaggcgggcgaggacagtcgcatggcgagggccgtgcggtacaaggcgtcgaag
gcctttgcggacgagatggatcgctacgtcgccggcctcgcgccgcggatgcgcttccat
cccattctggtggaggggcgcgtcatcgcgacggcgaccgacgtcaaggcggcgttcgat
aggacggatccaaggcttcgcctcccgcttcgcgtggatctcgtcaaggacgaactcttg
catcgcctgcgccagttcgagcgcgacgaggcgctttccgactgggtgcagaaagccgtg
gacgggctgccggacgaggcgtaccggcgcgcggagcgcacggcggccaagcgcaagcgc
gagcgcccggaactggacgagcaggaggaggcgcgccggctgctcggacgcgaggtgctt
cgccggatgcttcggcccgtgcgccacttcgtggagacgcttcgcttcgtggacacggcg
gggatgtaccgcgcttggttcgaacaggcggcgtcgaacccgcccgagggctttcatccg
gacgattgggctcagatctgccgccagaccgtgcgcgagatggacgagggcacgctctgg
tacgaggacgcgacgccgtacctgtatatgaaggagcagatcctcggccgcgcggtgagc
gcgcccatccggcacgtgttggtggacgaggtgcaggactactccgtgcttcagttgcgc
ctcatccgcagcctcttcccctacagccgcatcaccatgctcggcgatccagagcagctc
gtgtcgcctcatcttcccggtatcctcgaggaggacgagatggcgcggctcttccccggg
cttgtccgggtggcgtttgggcagagctatcgctcgacgaagcagattgtgctctttacg
cgcggcatggcgcaaaagggcgcggagattcagccgttcgatcgcgacggcgcgctgccg
cagctggcggaggtgtccggcgaggcgcagcaggccggcgtgatcgcgcggtggctcggc
gagtttgcggatgcggggtatcagacgacggcggtgctgaccaagacgcaggccgaggcg
gagcggctggcgaaagcgctggagcggctcggcgtgaagcttcggcgcctcgacaagcgc
gcggtgagcctcgagccgggcgtcgtggtggcgccggtgtatctggcgaagggcgtcgag
ttcgacggcgtcatcgtcgccaacgcgtcgcgggaacagtaccaaacggcgttcgaccgg
cagcttttgtatacggcctgcacgcgcgcgatgcatgatctgcgcatggtgtccgtgggg
gaggcgagcccgtgggtcctctcgcagcccgcagaaacctatgagcgcgtggacgcagca
gaggtgaacgccacgtga
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integrated database retrieval system
