Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_0129
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Entry
TC41_0129 CDS
T01821
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03030
DNA replication
aad03430
Mismatch repair
aad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TC41_0129 (dnaX)
03430 Mismatch repair
TC41_0129 (dnaX)
03440 Homologous recombination
TC41_0129 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aad03032
]
TC41_0129 (dnaX)
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_0129 (dnaX)
Enzymes [BR:
aad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TC41_0129 (dnaX)
DNA replication proteins [BR:
aad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TC41_0129 (dnaX)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TC41_0129 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_22
RuvB_N
AAA_5
AAA_30
TIP49
DnaX_C
AAA_7
AAA_19
Mg_chelatase
RCF1-5-like_lid
DUF815
AAA_2
AAA_18
Rad17
AAA_assoc_2
AAA_14
AAA_16
RNA_helicase
AAA_6
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AEJ42107
UniProt:
F8IIE8
LinkDB
All DBs
Position
131887..133644
Genome browser
AA seq
585 aa
AA seq
DB search
MAYQALYRAYRPQTFEDLVGQPHVRQTLTNALKSGQLAHAYLFCGPRGTGKTSTAKLLAK
AVNCLKPKDGFEPCNACEVCTSIQRGSNVDVQEIDAASNRGVDEIRDLRDHVHYLPTMAK
KKVYIVDEVHMLTPEAFNALLKTLEEPPAHVLFVLATTEPHRLPATIISRCQRFDFRRIA
PEAIVERLRLVAQSQGIEAADSALWRLAEAADGGLRDALALFEQAAAFGNGRIDDTTVAD
VVGSVDMSSLVALVGDLAERSFLSALDRLGRWYASGKDASRIVHDLLQVVRDLFIVKLSQ
SPDALAGKPVAPYLPVASRDDVTVDWLLAAMRRLGELYTQLRYVEEPRLALEAVLMGLAA
EVQSKDSVNALESVDPARMGVAVRPEGRPPEQPAQAPDVPVQASAPAPPAPEGAQSTPDA
SQMGSRPAPARAAAHRKRETLARLYRERDEALEARLREMWQDVLVSVKAKRVQTHAWLLH
GEVALATPRAVVLSFKSRIHREAVMKPADRAAVEAALAEVLGQPVQLFAILQADWEEFAA
SLAPALAEQAGSREAGEAPPVDVVQLAIDLFGADKVTVEDEGDDR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccaggcactctaccgcgcgtatcgcccgcagacgttcgaggacttggtcggg
cagcctcacgtgcgccagaccttgaccaacgcgctgaaaagcggccaactggcacatgcc
tacctgttttgcgggccacgcggtacgggaaagacgagcaccgcgaagctcttggccaag
gcggtcaactgtctgaagcccaaggacggcttcgagccttgtaacgcctgcgaggtctgc
acgagcatccagcgcggatccaacgtggacgtgcaggaaattgacgccgcgtccaaccgc
ggcgtggatgaaattcgggacttgcgcgatcacgtccattacctccccacgatggcgaag
aagaaggtctacatcgtggacgaggtccacatgctgacgccggaggcgttcaacgcgctc
ctcaagacgctggaagagccgccggcgcacgtcttgtttgtgctcgccaccaccgagccc
caccgccttcctgcgaccatcatctcgaggtgccagcgattcgatttccgccgcatcgcg
ccggaagccattgtggagcgcctgcgcctcgtggcgcagagccaggggattgaagcggcc
gattccgcgctgtggcggcttgccgaagcggccgacgggggattgcgcgacgcgctcgca
ctgtttgaacaggcggcggcgtttgggaacggccggatcgacgacaccaccgttgccgat
gtcgtgggcagcgtcgacatgagctcgctcgtggcgctcgtgggcgatctcgccgagcgc
tcgtttctctcggccctggacaggctcgggcgctggtacgcgtcgggcaaggacgcgagc
cgcatcgtgcacgacttgttgcaagtggtgcgggatttgtttatcgtcaagctgtcgcaa
agcccggacgcgctcgccggcaagccggtggccccctatctgccggtggcgtcccgcgac
gacgtcacggtggactggctgcttgccgccatgcgcaggctgggggaactgtacacgcaa
cttcggtatgtggaagagcctcgcctggcgcttgaagcggtgctgatggggctcgcggcc
gaggtgcaatccaaagacagcgtgaatgcgctcgaatccgtcgatccggcgcgcatgggt
gtcgccgtccggccggagggacgcccacctgagcagccggctcaagcccccgatgtgccc
gttcaggcatctgctccggcgcctccggcgcctgaaggggcgcagagcacgccggacgcg
tcccagatgggcagtcgccccgcgcccgcccgcgcggccgcgcaccgcaagcgcgagacg
ctggcgcggctgtatcgtgagagggatgaggcgctcgaggcgcgactgcgggagatgtgg
caggacgtgctcgtgtccgtgaaggcgaaacgcgtgcagacgcacgcttggcttttgcac
ggggaggtggcgctcgccacgccgcgcgccgtggtgctttcgttcaagagccgcatccac
cgagaggccgtcatgaaaccggcggatcgcgccgccgtcgaagccgcgctcgcagaggtg
ctcggacaacctgtgcaactctttgccatcctgcaggccgactgggaggagtttgcggcg
tcgctggctccggccctcgccgagcaagccggatcgcgcgaagcgggagaggcgccgccg
gtggatgtggtgcagttggccatcgacctgtttggagctgacaaagtgacggtggaagac
gagggagacgaccgatga
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