Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_0131
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Entry
TC41_0131 CDS
T01821
Symbol
recR
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TC41_0131 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_0131 (recR)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TC41_0131 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TC41_0131 (recR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
HHH_5
HHH_8
IMS_HHH
Coq4
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
AEJ42109
UniProt:
F8IIF0
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All DBs
Position
133955..134554
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AA seq
199 aa
AA seq
DB search
MYGYPEPVARAIEHFMKLPGVGPKTAARLAFHVLEMSEADVKAFAKALIDLKTALTECAV
CCNITEASPCAICRDPRRDRRVICVVQEPRDVIAMERTREYHGLYHVLHGAISPMEGVGP
QDIRIRELVTRVGENEIEEVILATNPNVEGEATAMYISRLLKPFQIKLTRIAHGLPVGGD
LEYADEVTLAKALEGRRAL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgtacgggtacccggagccggtggcgcgggccatcgaacatttcatgaagcttcccggc
gtggggccgaagacggccgcgcgcctggcatttcacgttctggaaatgagcgaggccgac
gtcaaagcctttgccaaggcgctgatcgatctcaagacggcgctcaccgagtgtgccgtc
tgctgtaacatcacggaagcgtctccgtgcgccatctgccgagacccgcgccgagaccgg
cgcgtcatctgcgtcgtgcaggaaccgcgagacgtgatcgccatggagcgcacgcgcgag
tatcatgggctgtaccacgtgctgcacggcgccatctcgccgatggagggcgtgggcccg
caggacattcggattcgggaactggtcacccgagtgggcgagaacgagattgaggaagtc
atcctcgccacgaacccaaacgtcgaaggcgaggcgacggccatgtatatctcgcgcctg
ctgaagccgttccagatcaagctgacgcgcatcgcgcacggtttgccggtgggcggcgat
ctcgagtacgcggatgaggtcacgctcgcgaaggccctggagggcaggcgagcgctgtag
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