Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_0389
Help
Entry
TC41_0389 CDS
T01821
Symbol
sbcD
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_0389 (sbcD)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TC41_0389 (sbcD)
Archaeal homologous recombinant proteins
TC41_0389 (sbcD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AEJ42355
UniProt:
F8IKX5
LinkDB
All DBs
Position
383470..384747
Genome browser
AA seq
425 aa
AA seq
DB search
MRILHTADWHFGKTLEGRDRAPEQWKFIEELAAICDDESVDLVLMAGDVYQTVNPSAEAE
EMFYHALHRLAAGGRRGVVIIAGNHDHADRIRAPRWLADSLGIVLVGLPKDEIRPTEARR
DAVWRPWGGVGAVELAVPSCPHRARIAAVPYPSESRLGEVLFDSLEEREMRRSYSQRLAD
WFADLARHFRPDTVNLLASHVYVAGGIESDSEIQIQVGGAYAVDPSAFPASAQYVALGHL
HRPQEMEGPGGVPIRYAGSPIAYSFSEAGQQKSVTLVEVEPGEHARWREIPLASGRPLVR
WRASSLAEVHAWLGEGRDADAWIDLEVRVDTELALRDIQDLRGAAPHIVHIRPVLPLQEA
AESQDVQTSRSASPEALFRRFFEEKVGVPPDDALVELFLELVRDVDVDEAEGSTESADAS
EEVGA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctccatactgcggactggcatttcggcaagacgcttgaagggcgggatcgc
gcgcccgaacagtggaagttcatcgaggaactcgccgccatctgtgacgacgaatcggtg
gatctcgtcctcatggcgggggacgtgtatcagaccgtgaatcccagcgcagaggcggag
gagatgttctaccatgcgctccacaggctggctgcgggcgggcgccgcggcgtggtgatc
atcgctggcaatcacgatcacgccgaccgcatccgcgccccgcgctggctggcggattcc
ctcggcattgtgctcgtcggcttgccgaaggacgagatccgcccgacagaagcgcgccgg
gatgccgtgtggcggccgtggggcggcgtgggcgccgtcgaactggccgtcccgtcgtgc
ccgcacagggcccgcattgccgcggtgccttacccctccgagtcgcggctcggcgaggtc
ctcttcgactccctcgaggagcgcgagatgcggcgcagctacagccagcgcctcgccgac
tggtttgccgatctcgcccgccacttccgcccagataccgtgaatttgctcgcgagccac
gtctacgtcgcaggcggcatagagagcgactcggagattcaaattcaggtgggcggcgcg
tatgcggtcgatccgtccgcgttccccgcgagcgcgcaatacgtcgcgctcggccacctg
caccgcccgcaggagatggagggccctggcggggtgcccattcgctacgccggatcgccc
atcgcgtacagcttttccgaggcggggcagcagaaatcggtgacgcttgtggaggtggag
ccgggtgagcacgcgcggtggcgggagattccgctcgcttcggggcggccgctcgtgcgc
tggcgtgcgtcgagcctcgccgaggtgcacgcctggctcggcgaggggcgggatgcggat
gcgtggatcgatctcgaggtgcgcgtggacactgagctggcgctgcgcgacatccaggac
ctgcgcggtgctgcgcctcacatcgtccacatccggcccgtcctgccgttgcaagaggcc
gccgaatcacaggacgtgcagacgtcgaggtccgcctcgccggaggcgctcttccgccgc
ttcttcgaagagaaggtcggcgtgccgccggacgatgcgctggtcgagctgttcctcgag
ctcgtccgggacgtggatgtggacgaagccgagggctcgacggaatccgccgacgccagc
gaggaggtgggcgcatga
DBGET
integrated database retrieval system
