Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_0538
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Entry
TC41_0538 CDS
T01821
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TC41_0538 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_0538 (uvrB)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TC41_0538 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TC41_0538 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
UvrD-helicase
UB2H
Microtub_bd
Kinesin
FlaG
Motif
Other DBs
NCBI-ProteinID:
AEJ42499
UniProt:
F8ICM3
LinkDB
All DBs
Position
546743..548734
Genome browser
AA seq
663 aa
AA seq
DB search
MSQLPGKFELVTDMKPQGDQPQAIEALVDGVYSGLRHQTLLGVTGSGKTFTMANIIAEVN
RPTLVIAHNKTLAAQLAAEFRAFFPNNAVEYFVSYYDYYQPEAYIPSTDTYIEKDAKIND
EIDKLRHSATAAILERNDVLVVASVSAIYGLGNPEEYRHHVLSLRVGAVMDRNQVLRKLV
DMQYTRNDINFTRGTFRVRGDVVEIFPASRDENAIRVEFFGDEIDRISEINVLTGEVVAR
RSHFSVFPASHYVTSRERLERAIERIRAELEERLAELRAQGKLLEAQRLEQRTNYDIEMM
LEMGFCSGIENYSRHLEGREAGEPPYTLLDYFPPGFLTFIDESHVTIPQLRGMYNGDRSR
KLTLIEHGFRLPSAADNRPLKFEEFERAVGQCIYVSATPGPYEQRHQQRIVEQIIRPTGL
VDPEIHVRPVKGQIDDLVGEIRERIRRDERVLVTTLTKKMAEDLTDYLKELGIKVRYLHS
DIKTIERMVILRDLRRGVFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSHTSLIQT
IGRAARNANGTVIMYADTITESMRIAIEETERRRQKQMAYNREHGIIPQTVRKAVRDVIE
STKVAESEEDYVAVAEKAQKLSGRERKELIAKLEQEMKAAAKALEFERAAELRDMIMELM
DAS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaattacctggcaagtttgagcttgtgacggacatgaaacctcagggcgatcag
cctcaggcgattgaggcgctcgtcgatggggtgtacagcggcctccgtcaccagacgttg
cttggcgtgacgggatcggggaagacgttcaccatggctaacatcatcgcggaggtcaac
cgcccgacgctggtcatcgcgcacaacaagacgctcgccgcgcagttggcggccgagttt
cgcgcgttctttcccaacaacgccgtggagtatttcgtcagctactacgactactatcag
ccggaggcgtacatcccgtcgacggacacgtatatcgagaaagacgcgaaaatcaatgac
gagatcgacaagttgcgccactccgccacggctgcgattctggagcggaacgacgtgctg
gtggtcgcgagcgtatccgccatctacggcctcggcaatcctgaagagtatcggcatcac
gtgctttcgctgcgggtgggtgccgtgatggaccgcaaccaggtgcttcgcaagctggtg
gatatgcaatatacccgcaacgacatcaactttacgcgcggcacgttccgcgtgcggggg
gacgtcgtcgaaatttttccggcctcccgcgacgaaaatgcgattcgcgtcgaatttttt
ggcgacgagatcgaccgaatctcggagatcaacgtgctgaccggagaagtggtggcgcgg
aggtcgcacttcagcgtctttcccgcgtcgcactatgtcacatcgcgcgagcgattggag
agggccatcgagcggattcgcgcagagttggaggagcggctcgcggaactgcgcgctcag
ggcaagctgctggaagcgcagcggcttgagcagcggaccaactacgacatcgaaatgatg
ctcgaaatgggcttttgctccgggatcgagaactattcgcggcacctcgagggccgtgaa
gccggagagcctccatacacgctcctcgattactttccgccgggctttctcacgttcatc
gacgagtctcacgtcaccatcccgcagctacgcggcatgtacaacggcgaccggagccgc
aagctgacgcttatcgagcacgggttccggctgccttcggccgcggacaaccgcccgctc
aagttcgaggagttcgagcgggccgtggggcagtgtatctacgtcagcgccacacccggg
ccctacgagcagcggcatcagcagcgcattgtcgagcagattatccgcccgacagggctc
gtggatccggagatccacgtgcggcccgtcaaagggcagattgacgatctcgtcggcgag
atccgcgagcgcatccggcgcgacgagcgggtcctcgtgaccacattgacaaagaagatg
gcggaggacctgaccgattatctgaaagagctcggcatcaaggtccgctacctccattcg
gacatcaagaccatcgagcgcatggtgatcttgcgcgaccttcggcgcggcgtgttcgac
gtgctggtggggatcaacctcctgcgagaggggctggatctgccggaggtgtcgcttgtc
gccatcttggacgcggataaggaagggtttctccggtcacacacgtcgctcattcagacc
atcggtcgcgcggcgcgcaacgcgaacggcacggtcatcatgtatgccgacaccatcacc
gagtcgatgcgcattgctatcgaggagacggagcgcaggaggcaaaagcagatggcgtac
aatcgagaacacggcatcatcccgcagaccgttcgcaaggcggtgcgggacgtgattgag
tccaccaaggtggcggagtcggaggaggactacgtggccgtggcggaaaaggcgcaaaag
ctgtcgggccgcgagcgcaaggaacttattgcgaagctggagcaggaaatgaaggcggcc
gcgaaagcgctcgagttcgagcgagccgcagagctgcgcgatatgatcatggaactcatg
gacgcgtcgtga
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