Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_0546
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Entry
TC41_0546 CDS
T01821
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aad03019
]
TC41_0546
Messenger RNA biogenesis [BR:
aad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TC41_0546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_29
AAA_22
SKI
ABC_tran
CoaE
AAA_28
AAA_30
AAA_21
AAA_16
PRK
MeaB
Motif
Other DBs
NCBI-ProteinID:
AEJ42506
UniProt:
F8ID40
LinkDB
All DBs
Position
557084..557950
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AA seq
288 aa
AA seq
DB search
MTNRLQAIVLTGMSGAGKSTAMQAFEDFGFFCVDNLPPALMPRLIDMAEHASGKLSKMAF
GCDLRGGELFEPLLMTVQEIKERKDVTVTLVFLDADDATLVRRYKASRRRHPLSMGGRLL
ESIQAERQKLAGVRQAADVVIDTSNLSANQLKQELSRRFVDHAMRLPVHVVSFGFKFGVP
LDADMVFDVRFLPNPHYLDHLRPYTGEDEPVYNYVMQWPQTQAFLKKAEDMLDFLIPEFQ
REGKSHLVIGVGCTGGKHRSVAVAKHIAEHLREIAVVDLTHRDFRRED
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaccgcttgcaggcgattgtgctgaccggcatgtcaggcgcgggtaagtccact
gcgatgcaggcgttcgaagatttcggttttttctgcgtcgacaacttgccgcctgcgctc
atgccgcggctcatcgacatggccgagcacgcgtctggcaagctaagcaagatggcgttt
ggctgtgatctgcgcggtggtgaactgttcgagcctctattgatgaccgtccaggaaatc
aaagaacgcaaggacgtcaccgtgacgctcgtgtttctcgacgcggacgacgcgacgctc
gtgaggcgctacaaggcgtcgcgccgccgccacccgctttcgatgggcggcaggttgctc
gagagcatccaggctgagcggcagaaactcgcgggcgtgcggcaggcggccgacgtcgtg
attgacacgtcgaacctatccgccaatcaactcaagcaggaattgagccgccggtttgtc
gaccatgcgatgcgccttccggtccacgtggtgtcgtttgggttcaagttcggtgtgccg
ctcgatgcagacatggtgttcgacgtgcggtttttgccgaatccccactacctcgatcat
ctgcggccttacaccggagaagacgaaccggtgtacaattacgtcatgcagtggccgcag
acacaggctttcttgaagaaggcggaggatatgctcgactttctcatcccggaatttcag
cgggaagggaagagccatctcgtcatcggcgtgggttgtacgggtggcaagcatcgctcc
gtagcggtcgcgaagcacatcgccgaacatcttcgagagatcgccgtggttgatctcacg
caccgggatttcaggcgggaggactag
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integrated database retrieval system
