Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_0562
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Entry
TC41_0562 CDS
T01821
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
TC41_0562
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Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
SNF2-rel_dom
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AEJ42522
UniProt:
F8ID56
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Position
570511..572793
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AA seq
760 aa
AA seq
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MMQMNLEQLLDEWRRDPQFREQVSAWRVVPARIGRYADFPVELHPELRASLAVRGIERLY
AHQREAWDLIQAGRDVVIATPTASGKTLCYNLPVLQSILRDPGVRALYVFPTKALAQDQV
AELHDLVRNLKTSVHTFTYDGDTPIHARQKIREAGHIVVTNPDMLHAAILPHHTKWLRLF
KNLRYVVIDEAHIYRGVFGSHVANVIRRLLRIAAFYGARPQFIFCSATIANPGELTSRLL
GRETAVVSESGAPEGEKHVILYNPPVVDPSLGLRQSALRAARRLGARLLQHEIPTILFAR
TRNQVELLASYLRRDARDRVRSRIVSYRGGYLPNERRAIERGLREGQVLGVVSTNALELG
VDIGSLQAAITVGYPGSVASTRQQMGRAGRRKGISAAIFVATSSALDQWMVRHPEALLDA
SPEAARIYPDNLLILMDHLKCAAYELPFSADEQFGVETTVELLDYLVDTRVLHRAADGRY
FYMADDMPAHAVSLRSAAQENVVIVDQSAHPPTVIGEMDRFSALTMLHEEAIYLHQSQMY
QVEKLDLENGKAFVRPVDCDYYTDAELAVHLQVLEENHLTEEGPLCHYTGDLAVHATPTL
FKKIKLETHENVGWGKIYLPEAELHTSGYWVTFDRSRWSASDDEWEAALKGLGHVLKQAV
ALHAMCAASDVHVAVEVRDPQYARPSVYVYDAYPGGVGIAERVYRDHDQIFATAFDMLQG
CPCECGCPSCVGPPTSGEPLKRWVESLLGSVVGASAPRGA
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagatgaacctggaacagctgttggacgagtggcggcgcgatccgcagtttcga
gaacaggtctcggcttggcgcgtggtgcccgcgcgcatcgggcgctatgctgactttcct
gtcgaacttcacccagaattgcgtgcatccctcgctgtgcgcgggatcgagcgcctttac
gcgcatcagcgggaggcgtgggatctcattcaggctggccgagatgtcgtgattgcgacg
ccgactgcgagcggcaagacgctgtgctacaacttgcccgtgctccagtccatcctgcgc
gatcccggcgtgcgcgcgctctacgtgttccccaccaaggcgctcgcgcaggatcaagtg
gcggaattgcacgatctcgtccgaaacctgaagacgtcggtgcacacgttcacgtatgac
ggggacacgcccatccacgcgcgccagaagattcgggaggcgggccacatcgtggtgacc
aatcccgacatgctgcacgccgccatcctgccgcaccacacgaagtggctgcggctgttc
aaaaacttgcgctacgtcgtgatcgacgaggcgcacatctaccgcggggtgtttggcagc
cacgtggcgaacgtcattcgccggctcctgcgcatcgcggcgttctacggcgcgcgcccg
cagttcatcttctgttctgcgaccatcgccaatccgggcgaactcacgtctcggctcctg
gggagggagacggcggtcgtctccgaatcgggcgcgccggaaggcgagaagcacgtgatt
ctgtacaacccgcctgtggtcgatccgtcgctcggcctgcgccagtcggcgctgcgggcg
gcgaggcggctcggtgcgcgcttacttcaacatgaaattccgaccatcctctttgcgcgc
acgcgcaaccaggtcgagcttttggcgtcctatctgcggcgcgatgcgcgggatcgcgtc
cgatcccgcatcgtcagctaccgcggcggctatctgccgaacgagcgccgcgcgattgaa
cggggcctgcgagaaggccaggtcttaggcgtcgtcagcaccaacgcgctcgagctcggc
gtcgacattggctccttgcaggcggccatcacggttggctatccgggctccgtggcttcc
accaggcagcagatgggccgcgccgggcgccgcaaggggatctctgcggccatttttgtc
gccacgagttccgcgctggaccagtggatggtgcgccacccggaagccctactggacgcg
tcgcctgaggcggcgcgcatctacccggacaacctcctcatcctgatggaccatctcaaa
tgcgcggcctacgagttgccgttttccgcggacgagcagtttggcgtcgagacgacggtg
gagctcctcgactacttggtggacacgcgcgttttgcaccgcgccgcggacggtcgctac
ttttacatggcggacgacatgccggcgcacgccgtgtccctgcgcagcgccgcgcaggaa
aatgtcgtgatcgtcgatcagtccgcgcatccaccgacggtcatcggcgagatggaccgg
ttcagcgcgctgacgatgctacacgaggaggccatctacctgcatcagtcgcagatgtat
caggtggaaaagctggacctcgagaacgggaaggcgtttgtgcgccctgtggattgcgac
tattacacggatgcggaactcgctgtgcacttgcaggtgcttgaagagaaccacttgacc
gaagaggggccgctttgccattacacgggcgatctcgccgtgcacgcaacgccgaccttg
tttaagaagatcaagctcgaaacgcacgagaacgtcggctggggcaagatttatctcccg
gaggccgagttgcacacgtcgggctactgggtgacgtttgaccgatcccgctggtccgcc
tcggacgacgagtgggaggcggcgctcaaaggcttggggcacgtgctcaaacaggccgtg
gcgctgcacgcgatgtgcgcggcgtccgacgtgcacgtcgctgtcgaagtgcgcgatccg
cagtacgcacggccgtccgtgtacgtgtacgacgcatacccaggcggggtgggcatcgcg
gagcgcgtgtaccgcgaccatgatcagatctttgcgacggccttcgacatgttgcagggc
tgtccgtgcgagtgcggatgcccgagctgcgtcgggccgccgacgagcggggagccgctc
aaacggtgggtggagtcgcttctcggctccgtcgtcggggcgagcgcaccgcggggggcg
tga
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