Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_0883
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Entry
TC41_0883 CDS
T01821
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03420
Nucleotide excision repair
aad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TC41_0883
03430 Mismatch repair
TC41_0883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_0883
Enzymes [BR:
aad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TC41_0883
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TC41_0883
MMR (mismatch excision repair)
Other MMR factors
TC41_0883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
Viral_helicase1
AAA_19
UvrD_C
AAA_30
AAA_11
DEAD
SLFN-g3_helicase
NACHT
AAA_16
ResIII
AAA_18
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEJ42836
UniProt:
F8IFD4
LinkDB
All DBs
Position
902557..904737
Genome browser
AA seq
726 aa
AA seq
DB search
MVPGHGSLQEGGGFMSETGTPPRPALDPYEEERQHLEQVRNIIRGALDAGPRMPVRDEDD
EDADEALTADVVADVAVAEMAEERRHQLRRALNDPYFGRIDFQPEGEAPQKLYIGKQGID
HPSTGERVVLDWRAPAASVFYSFTGQGDEARYEAPGGEVRGTVSLKRNIVVRDGDLVRVV
DSYVKGQNQAGSVDEFLLYRLADSKDSRLHDIVATIQAEQNEVIRADKNVPILIQGVAGS
GKTTVALHRLAYLLYQHPEKLRAEKMVIFAPSAMFVDYISEVLPELGVGDVQQTTFAAFA
LRVLDHVVLLPDPAKRLRERFALRPSQAYEAMRREIEVKGRVETLEALQAFLQDMEKKMV
PSRDVPSPVGPPISAETIARWFHVEYVRYPVRQRRDRVVARVKRQWEMQAKDAGKADKST
KRQIAAAAREFERAWPDLEPLPIYEAFLRHHPDLSLASIQRPAKYGARPLVEPEDLPLLL
AIHQWLHGVDARDVFHHVVIDEAQDFSPAHIRVLQAYCPSLSFTILGDLSQSIHSEAGFR
DWDEVRALFPGGSRYVEMSVSYRSTYEIVSFANRILGPFRPKVVAKPVFRSGDPVVVEPV
AWDSRFDALMERLSAESRRATTIAVLTRTEEDAHVYHQMCLESGLDAHLLTAAQTRYEGG
ISVVPVYLAKGLEFDSVILVDADEAHYRADERDAKLLFVGCTRALHRLRLLYCDRPSPLI
EWAVAD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtggtccctggtcatggttcgctccaagagggaggtggtttcatgagcgagaccggaacg
ccgcctcgcccggcgctcgatccgtacgaggaagagagacagcatctggaacaggtgcga
aacatcattcgaggggcgctcgacgcggggcccaggatgccggttcgggacgaggacgac
gaagatgcagacgaggccctgacggccgacgtcgtcgctgacgtggcggtcgccgagatg
gcagaggagcggcgccaccagctccggcgggcgctcaacgatccatacttcggccgcatt
gattttcagcctgagggggaggcccctcagaagctctacatcggcaagcaaggcatcgat
cacccgtcgaccggcgagcgcgtggtcctcgattggcgcgcccctgccgccagcgtgttt
tactccttcaccggccagggagacgaggcgcgctacgaagctccaggcggcgaggtccgc
ggcaccgtgtcgctcaagcgaaacatcgtcgtgcgcgacggcgatctcgtccgggtcgtc
gacagctacgtgaaagggcagaatcaggcgggcagcgtcgacgaatttttgctctaccgc
ctcgcggattctaaggacagccggctgcacgacatcgtggccacgattcaggcggagcaa
aatgaggtcattcgcgcggataagaatgtgcccatcctcattcagggcgtcgcaggaagc
ggaaaaacgacggtcgcactgcatcggctcgcctatctgctgtaccagcatccggaaaag
ctgagggcggagaagatggtcatctttgcgccttccgcgatgttcgtggattacatttcc
gaggtgctgcccgaactcggcgtgggggacgtccagcaaacgacgttcgcggcgtttgcg
ctccgcgtgttggaccatgtggtgctcctgcccgatccggccaagcgactccgcgagcgg
ttcgcgcttcggccgtcgcaggcgtacgaggcgatgcggcgcgagatcgaggtgaagggg
cgggttgagacgctggaggccctccaagccttcctgcaggatatggagaaaaagatggtg
ccaagtcgggacgtcccgtctccggttgggccgcccatttctgcagaaaccatcgcccgc
tggtttcacgtggagtacgtgcgctacccggtgcgccagcggcgcgatcgcgtggtcgcc
cgtgtgaagcggcagtgggagatgcaggcgaaggatgcgggcaaggcggataagtccacc
aagcggcagattgcggccgccgcgcgggagttcgagcgggcgtggccggacctcgagcct
ctgcccatttacgaagcgtttctgcggcatcatccggatctgtcgctcgcgtccatccag
cggccggcgaaatacggggcccggccgctcgtggaaccggaagatctgccgctgctcctc
gccattcaccagtggcttcacggtgtagacgcgcgggatgtgtttcaccatgtcgtgatc
gacgaagcgcaggatttttctccggcgcacattcgggtgctgcaggcgtactgtccaagc
ctgtcctttaccattctcggggacctgtctcagagcattcacagcgaggcgggattccgg
gactgggatgaggttcgcgcgctgtttccaggtggaagccggtacgtggaaatgtcggtg
tcgtaccgctcaacttatgagattgtctcgttcgcaaaccggatcctcggacccttccgg
ccgaaggtcgtggcaaaacccgtgtttcgcagcggcgatcctgtcgtcgtcgagcccgtc
gcgtgggacagccggttcgatgcgctcatggagcggctgtcggcagaaagccggagggcg
acgaccatcgcggtattgacgcggacggaagaggatgcgcacgtctatcatcagatgtgc
ctggagtcgggactcgacgctcaccttctcacggccgcccagacgcggtacgaaggtggt
atcagcgtcgtgcccgtttacctggccaaggggctcgagttcgacagcgtcatccttgtg
gacgccgacgaggcccattaccgcgccgacgagcgggatgcgaaactgttgttcgtcgga
tgcacgcgagcgttgcatcgcttgcggctgttgtactgtgaccgcccttcgccgctcatc
gagtgggccgtggccgattaa
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