Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_1245
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Entry
TC41_1245 CDS
T01821
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TC41_1245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aad03021
]
TC41_1245
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_1245
Enzymes [BR:
aad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TC41_1245
Transcription machinery [BR:
aad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TC41_1245
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TC41_1245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AEJ43187
UniProt:
F8IHA2
LinkDB
All DBs
Position
1234852..1235052
Genome browser
AA seq
66 aa
AA seq
DB search
MIYPSIDRLLERCNSKYALVVLAAKRARKLQNETLNQPGASTTRNVSRALWEIHDGVVRC
KNFDGE
NT seq
201 nt
NT seq
+upstream
nt +downstream
nt
ttgatctatccgtccattgaccggttgttggagcggtgcaacagcaaatacgcgctcgtt
gtgctcgcggcgaagcgcgcgcgcaagctgcagaacgagaccctgaatcagcctggcgcg
tcgacaacgcggaacgtgagccgcgcgctgtgggaaattcacgacggcgtcgttcgctgc
aaaaacttcgacggcgagtga
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