Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_1376
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Entry
TC41_1376 CDS
T01821
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aad03016
]
TC41_1376 (truB)
Enzymes [BR:
aad01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TC41_1376 (truB)
Transfer RNA biogenesis [BR:
aad03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TC41_1376 (truB)
Prokaryotic type
TC41_1376 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruD
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEJ43313
UniProt:
F8III1
LinkDB
All DBs
Position
1354565..1355473
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AA seq
302 aa
AA seq
DB search
MQALDGVLLIDKPKGMTSHDVVHRVRRKLGVRRVGHAGTLDPMATGLLMICVGRVTRLLE
YLGQGDKEYCGTVVFGVGTDTDDAEGTVVAQAQATGLDLAAVREAAARLTGEIRQRPPAY
SAIHIDGRRAYDLARQGKKVEIPERTVHVRTLTLDEFHHEGELAVARFHVRCSKGTYVRA
LCRDLGALVGVPAHMRSLRRLAIGCARVEDAIPLDDWMASANPASHLRDPLLYLEDLPMW
HPPREVLERLANGQTVEVGDALSLSPGDLVLVIHAGAVAAVGEVVDRQPAAVRPKKVFWK
RG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagcgttagacggcgtcctgctcatcgataagcctaagggaatgacgtcccatgac
gtggtccatcgcgtccgccgcaagctcggcgtgcggcgcgtcgggcacgcgggcacgctc
gacccgatggcgacgggccttttgatgatctgcgtcggccgcgtcacccgccttctcgaa
tacctcggccagggcgacaaggagtactgcggcacggtagtgttcggcgtcggcacggac
accgacgacgcggagggcaccgtcgtggcgcaggcgcaggccacgggtctggatctcgcc
gccgtgcgcgaggccgcggcccggctcaccggcgaaattcggcagcggccgcccgcatac
tccgcgattcacatcgacggtcgccgggcttacgatctcgctcgccagggcaagaaggtg
gaaatcccagagcggaccgttcacgttcgaaccttgaccctcgacgagttccatcacgag
ggcgaactcgctgtggcccgctttcacgtccgctgctcgaaaggcacttacgtccgggcc
ctgtgccgcgatctcggcgcgctcgtcggtgtgcccgcacacatgcgctcgcttcgccgg
ctcgccatcggctgcgcgcgcgtcgaggacgccattcctctcgacgactggatggcttcg
gcgaatcccgcctcgcacctacgcgatccgctcctgtacctcgaggacctgccaatgtgg
caccccccgcgcgaggtgctggagcgccttgcgaacggccagacggtcgaggtgggcgac
gcgctgtcgctctcgcctggcgatctcgtcctcgtgatacacgccggcgccgtggccgcc
gtcggtgaagtcgtcgatcgccagccggccgcggtccggccgaagaaggtgttttggaag
aggggatga
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integrated database retrieval system
