KEGG   Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_1547
Entry
TC41_1547         CDS       T01821                                 
Symbol
dinG
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
aad  Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Brite
KEGG Orthology (KO) [BR:aad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aad03400]
    TC41_1547 (dinG)
Enzymes [BR:aad01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     TC41_1547 (dinG)
DNA repair and recombination proteins [BR:aad03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    TC41_1547 (dinG)
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII DEAD_2 SecA_DEAD Asparaginase_C T4SS-DNA_transf
Other DBs
NCBI-ProteinID: AEJ43479
UniProt: F8IJW7
LinkDB
Position
complement(1520966..1523803)
AA seq 945 aa
METTGLDPERAEILEIGALRVRGEEIVDTFHALVRPERPIPDEITRLTGLSDADVADAPP
EREALMRFAEFAGDTPMAGHHWAFERSFLLPRVARYGLPLKPGDGLCTLSLARILAPRLM
SHRLEYLARRLRLRAEGSHRALADARTAHQLLMRLEDKARRLPSGVIELLAGLAGLYSPL
TAAWFEQALGRHEEHQGPPLEERQGLYYTRPDPPARPEERDALPMPDRAKLDEIVRKARD
VLMPDGPLAASMPGFEARPGQVAMVEAVAQALAEGKHAMVEAGTGTGKSLAYLVPAALVA
MATGEPVVVSTHTLSLQDQIAERDFPLLRRIFGDDLRLVVQKGRNNYVCLRKVRSEARLA
TMATPVDDIQGVMALLVWLTETPDGTRETLSKSSVGPGLWARVQSESESCINRRCPFFQP
CYYFRTKQAAHSAHLIVTNHSLVMSDLASDHRVLPKYAHLVVDEAHHLEEQATHHLGFEV
QSGVMAALSHRLVRDRGRAGVLAEVTRMLEELHIRGTTLEWLEEGQEWVGALGTEVDAAF
QAIAAYVPAGQSEVRLDAAWRQSDSFHMYREALDRTQAGVKRLQDLRARLLDLVKSLPSD
DHVGRVVDAAGFLGAWLDGIARMQAVLEEHPDDVTWAAVQASGSRVRVSVHRAPIDVARV
LKQHLFDPLRSVVLTSATLAVNGEFGFAIRKLGLEEHAREDRFIALTVPSPFAMDKQARL
YVPSDVPDIAAAPPEEAAMWLAASITDLAEASRGRMLVLFTSHALLRETARLARAPLAER
GLSLLAQEMDGSRAALLEAFRAHPESVIFGAQTFWEGIDLPGDQLTSLVIVRLPFAPPTH
PVTAARLERLEASGQNAFRALSLPEAVVRFRQGVGRLIRTQQDRGVIVVFDKRIVTQRYG
SMFWKSIPGLRPRVVPERDLVAEVRKFLRDTPSSPEHGARASLSL
NT seq 2838 nt   +upstreamnt  +downstreamnt
ttggagacgacggggcttgatccggagcgtgccgagatcctggagatcggcgcgctgcgg
gtgcgcggcgaggagattgtcgacacgtttcacgcgctggtgcgccctgagcgccccatt
cccgatgaaatcactcggctgacgggcctgtcagacgcggacgttgccgatgccccgccc
gagcgtgaggccctgatgcggttcgcggagttcgcaggtgacaccccgatggcggggcac
cattgggcgttcgagcgaagttttttgctcccgcgggtcgcgcggtacggtttgccacta
aagccaggggacggactctgcaccttgagtctggcccggattttggcgccgaggctcatg
agccatcggctggaatatctggcgcgccgcctgcgcttgcgcgccgaggggagccatcgt
gcgctcgcggacgcgcgtacggctcatcagttgctcatgcggctcgaggacaaggcgcgc
cgcctcccctccggcgtcatcgaactgctcgcggggctcgcgggactttactccccgctc
actgcggcctggttcgagcaggctttaggtcggcatgaagaacaccagggccctcccctc
gaggagcggcagggcctctattacacaagacctgatccgcccgcgcggccggaggagcgc
gacgcgctgcccatgcccgatcgcgccaagctcgacgagatcgtgcggaaagcgagagac
gtgctgatgcccgacggccccttggcggcgtccatgcccgggttcgaagcccgtcctggg
caggtggccatggttgaggcggtcgctcaggcgttggcggagggcaagcacgcgatggtc
gaggcgggcaccgggacgggcaaatcgctcgcgtacctggtgcccgcggcgctcgtcgcg
atggcgacaggtgagcccgtggtggtcagcacccacacgctctcgctgcaggaccagatc
gcggagcgggactttccgctgcttcggcggatcttcggcgacgacctgcgcctggtcgtc
cagaaaggacgcaacaattacgtctgcctgcgaaaggttcgaagtgaagcgcgccttgcc
accatggccacgcccgtcgacgacatccagggcgtcatggcgctactggtctggctgacg
gagacacccgacggcacgcgcgagacgctgtccaagtcgtcggtggggccaggactctgg
gcccgggttcaaagcgagagcgagtcgtgcatcaatcggcgttgcccgttcttccagccg
tgctactactttcgaaccaagcaggcggctcattctgcgcacctcatcgtgaccaaccac
tcgctcgtgatgtccgatctggcctccgaccaccgtgtcctgcccaagtatgcgcatctt
gtcgtcgacgaggcacatcacctcgaggaacaggcgacccatcacctcggcttcgaagtc
cagagcggcgtcatggcggccttgtcccaccgccttgtgcgcgatcgcggccgagctggc
gtgttggccgaggtcacccggatgttggaagaactccacattcggggcaccacgctcgag
tggctcgaagagggtcaagaatgggtgggggcgctcggcaccgaggtggatgcggcgttt
caggctatcgccgcctacgtgcccgcggggcagtcggaggtgcgcctcgacgcagcgtgg
cgccaaagcgactcgttccacatgtaccgcgaggcgttggacagaacccaggctggcgta
aagcgactgcaggatctgcgcgcgcgactcctggatctggtgaaatcgttgccctcggac
gatcacgtcgggcgcgtcgtcgacgccgcgggctttctcggggcctggctcgacggaatc
gcgcggatgcaagccgtcctagaagaacaccctgacgacgtgacgtgggccgcggtccag
gccagcggatctcgtgtgcgggtgagcgtgcaccgagcccccatcgatgtggcccgcgtg
ctcaagcagcacctgtttgacccgttgcgctcggtggtgctgacctcggccacgcttgcg
gtgaatggggagtttggattcgcgattcggaagctcggtctggaggagcacgctcgcgaa
gaccgtttcattgcgctgaccgtcccgtctccgttcgcgatggacaagcaggcgcgcctc
tatgtgccgagcgatgttccggacatcgcggcagcgccgccggaggaagctgccatgtgg
ctggccgcgtccatcacagatctcgcagaggcgtcgcgcggcaggatgctcgtcctgttc
acgagccacgcgctgcttcgagagaccgcgcgtctggctcgcgcgccgctcgcggagcgc
ggcttaagcttgctcgctcaggagatggatgggagccgcgccgcgctgctcgaagcgttt
cgggctcacccagagagcgtgatattcggcgcgcagacgttctgggagggcatcgacctc
ccgggcgatcagctgacctcgctcgtgattgtgcgcttgccgtttgccccgcccacacac
ccggtgacagccgctcggttagagcgcctggaggcgagcggtcagaacgcgtttcgagcg
ctcagcctgcccgaggcggtggtgcgttttcgccagggcgtcgggcgcttgatccgcacg
cagcaggatcggggcgtaattgtcgtcttcgacaagcgcatcgtgacgcagcgatacggg
tcaatgttctggaagtccatccctggacttcggccccgggtcgtgccggagagagatctc
gtcgctgaggtgcggaagtttttgcgagacaccccatcttcccccgagcatggggcgcgg
gcttcgctctcactctaa

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