Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_1600
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Entry
TC41_1600 CDS
T01821
Symbol
rpsA
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
TC41_1600 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
aad03011
]
TC41_1600 (rpsA)
Ribosome [BR:
aad03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
TC41_1600 (rpsA)
Bacteria
TC41_1600 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RNase_II_C_S1
OB_RRP5_4th
PCB_OB
S1_2
Motif
Other DBs
NCBI-ProteinID:
AEJ43530
UniProt:
F8IK18
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Position
complement(1567958..1569136)
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AA seq
392 aa
AA seq
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MKREAIDMSEDLREMLTDAAVREGDVVTGEVTAVDDHGVTVALPHGYEGHISPQELSAVP
GTHPSDVVSVGSTVTAQVLKVDMESGHVTLSKRRAEQASAWERMQRLLESGEPIEVEIRD
VVKGGLVADVGVRAFIPASLVDRHFVENLEQFKGQKLRAKVIEVDPQKNKLILSRRAVLE
EESEARARKLFEELKPGDVIEGTVQRLTDFGAFVDVGGADGLVHISELSFSHVNHPSEVV
REGDRVKVRVLRVDPEAGRISLSIKAALPEPWETYAHEFQPGDVVQGVVRRVLDFGAFVE
LRPGLEGLVHVSQISNERVDKPSDVLQPGQEVTVRVLSVDPERKRISLSMRDSSQPRGGQ
GRGGRRDRRPTEPRNEGASGPTLGDLFGDLFK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggaggccattgacatgtcagaggatttgcgtgaaatgttgaccgatgcggcg
gttcgcgagggggacgtggtgaccggcgaagtgacggccgtggatgatcacggtgtgacc
gtcgcgctgcctcacggttatgaggggcatatatcgccgcaggagttgtcggcggtgccg
ggaacgcatccgagtgatgtcgtgagcgtgggcagcacggtgacggcgcaagtgctgaag
gtcgacatggaatccggccatgtgacgctttcaaagcggcgcgctgaacaggcgtctgcg
tgggagcgaatgcagcgattgctggaaagtggagagccgattgaggtggagattcgggac
gtcgtcaagggcggcctcgtggcagacgtcggcgtccgcgcgtttattccggcgtctttg
gtggatcgccacttcgtcgaaaacctcgagcagtttaaggggcagaagctccgcgccaaa
gtgattgaggtcgatccgcagaagaacaagctgatcctctcgcggcgcgccgtgttggag
gaagaaagcgaggcgcgggcaaggaagctgttcgaagagttgaagccgggagacgtcatt
gagggaacggtgcagcggctgaccgacttcggcgcgtttgtcgatgtgggcggcgccgac
gggctggtccacatctccgaactgtcgttttcccacgtcaaccatccatccgaagtggtg
cgcgagggcgatcgagtcaaggttcgcgtgctgcgcgtagatcccgaggccggtcgcatt
tcgctgtccattaaggcggcgctgccggagccctgggaaacgtacgctcacgagtttcaa
ccgggagacgtcgtccaaggagtggtgcgccgagtgttggatttcggtgcgtttgtcgag
ctccgccccggcttggaagggctggttcacgtttctcagatctcgaacgagcgcgtcgat
aagccctccgatgtccttcagcctggccaagaggtgacagtccgcgtgctgagcgtggat
ccggagcgcaaacgcatttcgctgtccatgcgggattcgtctcagccgcgaggcggccaa
gggcgaggggggcggcgagatcgcaggccgactgagcctcgcaacgaaggcgcctctggc
ccaacgctcggcgatctgttcggcgatttgtttaagtga
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