Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_1615
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Entry
TC41_1615 CDS
T01821
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03420
Nucleotide excision repair
aad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TC41_1615
03430 Mismatch repair
TC41_1615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_1615
Enzymes [BR:
aad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TC41_1615
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TC41_1615
MMR (mismatch excision repair)
Other MMR factors
TC41_1615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
DEAD
ResIII
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AEJ43544
UniProt:
F8IKG6
LinkDB
All DBs
Position
complement(1583328..1584695)
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AA seq
455 aa
AA seq
DB search
MWTEEQWAVIEPKNVSSVVVAAPGSGKTTVMTEHLAQVIATGRIPSQRILAMTFTRQAAE
HMRQKLRGHERLHAVDVESCTMGTFHSVFFRALLEADFQVYPLLGQREQYALMREAVVDV
LGERRAVSTYELQSYLTLYSRMVGGMEIDKVDHQEKQILESYMRRKRALNRWDHDDILLA
SLHLFQSPSASKIRLFGMSYILVDEFQDTNQLQWALLTSLVERNGALAFVVGDDDQSIYA
FRGASPVFLQRAAEVLPNARRYLLTLNFRSDRRILGHAAQLIRHVKVRVDKPLRSVSEAE
GVCMAYEVPDRTAQWRLVAHLLRRAIREGRSAAILGRTRHQLAVAWMALRRAFGAQWDIV
AKGVEFRTFHDSKGKEWDIVALLDMAVSPGSTFDIDIDEERRLLYVAMTRARHELYALVP
RVMHGAPRRIHPFLLESGMEVCPVNDTLKNDEVRN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtggacggaggaacagtgggccgtgatcgaacccaagaacgtctcgtctgtcgtggtg
gcggcgcctgggagtggcaagaccaccgtgatgacggaacatttggctcaggtcatcgct
acgggacgaataccctctcagcgcattctcgccatgacatttacgaggcaggctgccgaa
cacatgcgtcagaagttacgagggcacgaacgactgcacgctgtagacgtggagtcctgt
accatggggacgtttcattccgtcttttttcgagcgcttttagaggcggattttcaagtg
tatcctctcctcggccagcgggagcagtacgctctcatgcgagaagccgtggtggacgtt
ttgggcgaacgccgcgccgtgagcacgtacgaactccaatcgtatctcaccctgtatagc
cggatggtcggcggaatggagattgacaaggtggaccatcaagaaaagcaaattcttgag
tcatatatgcgcagaaagcgagcgctaaaccgctgggaccatgacgatattcttctcgcg
tcgctccatctgtttcagtcgccttcggcgtcgaagatacggctgtttggaatgagctac
attttggtggatgagtttcaggacacgaatcaactgcaatgggctctcctcacgtcgctc
gtggagcgaaacggcgctttagccttcgtcgtcggcgatgacgatcagtccatttacgct
tttcgcggcgcttcgcccgtgtttctccagcgcgcggcggaggttcttcccaacgctcgt
cgatacttgctcaccttgaatttcagatccgaccgaagaatcttaggtcacgccgcgcag
ctgattcgtcacgtcaaagttcgagtggataagccgctccgcagcgtgagcgaggcagaa
ggtgtctgcatggcgtatgaagtccccgaccgaaccgcgcaatggcgtcttgtggcgcat
ctgctccgccgcgcgatacgtgaagggcgctctgcggcgatcctggggcgcacgcgccat
cagctggccgtcgcgtggatggcgcttcggcgagccttcggagcgcagtgggatattgtc
gcgaaaggagttgaatttcgcacctttcacgacagcaagggtaaggaatgggatatcgtg
gcgttgcttgatatggccgtgtctcctggttcgacttttgacatcgatatcgatgaagag
cggcgcttgttgtacgtcgccatgacgcgagcccgacatgaattgtacgcgctcgtgcct
cgtgtgatgcacggagcgccgcgtcgcattcatccgtttctgctggagtcgggaatggaa
gtgtgtcctgtgaacgacacgctgaagaacgatgaagttcgaaattag
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