Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_1676
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Entry
TC41_1676 CDS
T01821
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TC41_1676 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_1676 (xseA)
Enzymes [BR:
aad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
TC41_1676 (xseA)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
TC41_1676 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF7117
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AEJ43604
UniProt:
F8IKM6
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All DBs
Position
complement(1630803..1632212)
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AA seq
469 aa
AA seq
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MNALTRPAAEAEAVVTVTELNRRIKERLESDPRLIQCRVVGEISNFKHHPSGHMYFTLKD
ETSRIRAVMFSSRNRRLQFQPEDGMRVIAFGSVGVFERDGQYQLYVEDLEPDGLGALYVR
YEQLRQRLAQEGLFAPERKRPLPRFPLRVGVVTSPTGAVIRDICTTIERRYPLARVILAP
AQVQGPDAAPTIVRALEILYALEPRVDVIIVGRGGGSLEELWPFNEEMVVRAVARSPVPV
VSAVGHETDVTLCDFAADVRAATPTAAAELVCPHQAELRAYLEQASARARKAALVKVSWG
RERLLDLAGRPALRDPTRIIAVRRQLVDYMETRVREAQRRPIGLRRRALADLERRLQRVP
LGGAIQGRRRDLMRLEHQVRSLTERQLLVQSRKLEGVIGKLEALNPLAVLRRGYGVILDE
DGRSVLTSAQSLSPGKRIGIRMHDGTVEAEVKGRGGGAGGRVEQLRLDL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgctgacgcgaccggcggccgaggcggaagcggtggtcaccgtcaccgaactc
aatcggcgcatcaaggagcgtttggagtcggatccgagactcatccagtgtcgcgtggtc
ggggagatctcgaatttcaaacaccacccaagtggccacatgtattttacgcttaaggac
gagacgagccggatccgagcggtcatgttcagcagccggaaccgccgtctccaattccag
cctgaagatgggatgcgggtgatcgcattcggctccgtgggcgtcttcgagcgggatggc
cagtatcagctctatgtagaggatcttgagcccgatggattgggcgccctgtacgtccgc
tacgaacagcttcgacagcggctcgcccaagaggggttgtttgctccggagcggaagcgg
cctctccctcggtttccactgcgcgtgggagttgttaccagtcccacaggcgcggtgatt
cgagacatttgcacgaccatcgaacgacggtatccgctcgctcgggtcatcctcgcgccg
gcgcaggtgcagggccctgacgcggcgcccacgattgtacgcgcgctcgagattttgtac
gccctcgagccgagggtggacgtgatcatcgtagggcgtggcggcggctcattggaggag
ctttggccgttcaacgaggagatggtggtgcgggctgtggcgcgatcgcccgtgcccgtg
gtctcagctgtcgggcacgagaccgacgtgaccctgtgcgatttcgcggcggacgtccga
gccgcgactcctacggcggctgcagagctcgtgtgtccgcatcaagctgagcttcgggcg
tacttggagcaggcgtcggccagggcgcggaaggcggcgttggtcaaggtcagttggggg
cgagagcgtctgttggatctggcggggaggcccgcgcttcgggacccgacgcggatcatt
gcggtgagacgccagctcgtcgactacatggaaacgcgcgtgcgtgaggcccagcgccga
cccattgggttgcgccgtcgagcgctggccgatctggagcgaaggcttcagcgcgtgccg
ctgggcggggcgattcagggccgcaggcgagacctcatgcgcctcgagcaccaggtgcgt
tcgcttaccgaacgccagttgctcgtgcagagccggaaactcgagggcgtcattggcaag
ctcgaggcactgaatccgttggccgtgttacggcgcggatacggcgtgattcttgacgag
gatgggcgatctgttctcacctcggcccaatcgctcagcccaggcaagcgcattggaatt
cgaatgcacgacggcaccgtggaagcggaggtgaagggccgtggaggaggcgcgggcggc
cgagtggaacagctccgattggacctttga
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