Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_2196
Help
Entry
TC41_2196 CDS
T01821
Name
(GenBank) ATP-dependent nuclease subunit B-like protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_2196
Enzymes [BR:
aad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TC41_2196
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
TC41_2196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AEJ44102
UniProt:
F8IFL8
LinkDB
All DBs
Position
complement(2091426..2094932)
Genome browser
AA seq
1168 aa
AA seq
DB search
MGNRVEWWIGAAGSGKSSRVAEEMRRAAEAHPFGPPVFWVVPESTAFAAETLLMDRVRAA
FRVEVVTMKRLADRVCAHGGMARPRLTQVGRQLLLRAAYDELEPSLGPLRRAVRNSSLYH
HLLSAFDELTAHGVSPEQLAALLEMSAARCDEVEKEQRAVHRSLVGKLGDVLKLYVRYRQ
RAEAAGFVDPALLFLDAVYAVPHVSWLEGASLYLDGFHAFSPAERQFISALARRVKRLVI
TWEDTGLEGERWEALREEASLLPAWPHLSVWLDKHEDRFVGEVQAVAAYHLLACARDFAR
DSLEQVFCRMPLGAAEGRFGTSPLIHLERALAGHPTVQPLMGIRVSAFGHREEELCAVAD
EIAHLVQHERVRPRDIAVCVPTLDGIGRRLADELELRGVPVAIDSFSTLADHPVGQLLRA
AIAVVRTGFSLDAVAALLRCPLVPVKRREAFDLYLREHDVSGFSAWLAPERWDFAARAPR
TASGLCDEEADEIRRHVADALRPIIQVFAEPVLRPVEAARALWELLEAFHVKDTLAQSVV
QVGEDPMAGVIHEQAWSGITALLDDLATLQPEVALPTYEVADLVLESMASLRLTRIPSDA
DAVFVCDFARADNWSRPRVFVVSADDASLPPRPDEGGILRDDERLAFAEVFLRPLGRTSE
DERRALECLPYRVMTRASEALVVTYAATDDGIERHLTPTLASLVERGHLTVDAACGEGAV
PVHPVQAMRLLADALSRVHAGAPFEQVMQDPVVQDVLTHVWTGATDVDRFQRVLAGLCHR
PRPWRLPPPWIRALYGDPIRVSVSRLETYAKCSYRHFAQYALRLEPLALQPEAERSAGTW
IHAAVQLATQRLAEDYPRLSELGHAELEAALLEIAHQALEQAAQATKLQVTLERPDVAVY
VGERRRHFEFVVRAIWMQLSRGQMRPLWLEKEFRDVDVGEWNGARVVLDGRIDRVDRLQA
GEAALCVYDYKSSETALHPSKVYQGLQLQLLIYAAMAMREAEAVEGAPVRLYGAFYMPLV
AKRDALDVPPEEREGSAQLGAYRAKGFFLREEAAVLRVNEDLAPGRGSALYGRQFRADGA
WAADATAWRDDEWQVVLRHVERRAEEAAKAIAEGEVRVSPYHLSHVDSGCTNCPYNALCH
FERADHFDLYRSVPKLKFDDVIAGGDAN
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaccgggtggagtggtggattggagctgcggggagtggcaaatcgtcccgtgtg
gcggaggagatgcgccgcgccgcggaagcccatccatttgggccgcccgtgttttgggtg
gtgcccgagtcgacggcgtttgcggccgagacgctgctgatggatcgcgttcgcgcggcc
tttcgcgtcgaagtcgtgacgatgaaacgacttgccgaccgcgtgtgcgcgcacggcggg
atggcgcgaccacgcctgacgcaagtggggcggcagcttctcttgcgcgcggcgtacgat
gaactcgagccttcacttggcccactgcgccgtgccgtgcgcaattcgtccctgtatcat
caccttttgtccgcattcgacgagcttaccgcgcatggggtgtccccggaacagctcgcg
gccttgttggagatgtccgcggctcgctgcgatgaagtggagaaggagcagagggcggtg
catcgctctctcgtcggcaagctgggcgacgtgctgaagctgtacgtgaggtaccgacaa
cgcgccgaagccgcgggcttcgtggatccggccctcctgttcctcgatgcggtctacgcg
gtgccacacgtctcgtggcttgaaggtgcgtcgctgtatctcgacggttttcacgccttt
tcgcctgcagagcggcagttcatctcagcgcttgcgcggcgcgtgaagcggctggtcatc
acctgggaggacaccggccttgagggagagcggtgggaggcgcttcgcgaggaggcgtcg
ttgcttcccgcgtggccgcatctatccgtttggctcgacaaacacgaagatcgattcgtc
ggcgaagtgcaggccgtcgccgcgtaccacctcctcgcgtgcgcacgcgatttcgcgcga
gattcgctggaacaggtgttttgccgcatgcccctcggtgccgccgagggccggttcggc
acatcgccgctcattcacctcgagcgggcgctcgcggggcacccgacggttcagcccttg
atgggcatccgtgtgagcgcgtttggccatcgcgaggaggaactgtgtgcggtcgcggac
gagattgcgcacctcgtgcagcacgagcgggtgagaccgcgggacatcgcggtgtgcgtc
ccgacgctcgacggcatcgggcgccgtctcgccgacgagctggagctgcgcggggttccg
gtcgccatcgactcgttctcaaccctggcggaccaccctgtcggtcaactgctgcgcgcc
gccatcgccgtggtgcgcaccgggttcagtctcgacgccgtcgccgcactgctccgctgc
ccactcgtgcccgtgaagcggcgggaagcgttcgatctgtatctccgcgagcacgacgtc
agcggcttctcggcatggctggcaccagagcgatgggactttgccgctcgcgccccgcgc
acggcatccggtctttgcgacgaggaggccgatgagatcaggcgacacgtggccgacgcg
ctccggcctatcatccaggtttttgcagagccggtgcttcgccctgtggaagcggcgcga
gcgctctgggagttgcttgaggcgtttcacgtcaaggacaccctcgcgcaatccgtggtc
caggtgggggaggaccccatggctggcgtgatccacgagcaggcgtggagcgggattacg
gcgctcctcgacgatctcgccactctccagcccgaggtcgcgctcccgacctatgaggtg
gccgatctcgtcctcgagtccatggccagtctgcgcctcacgcgcatcccgagcgatgca
gacgcggtgttcgtgtgcgatttcgcgcgcgccgacaactggtcccgcccgcgggtgttc
gtcgtgtccgcggacgacgcctcgctgcccccgcgcccggatgaagggggcatcctgcgc
gatgacgaacgcctcgcttttgcggaggtctttctccgccccctcgggcgcacttcggag
gatgagcggcgcgccctcgagtgcctgccgtaccgggtgatgacgcgcgcgtccgaggcg
cttgtggtgacgtatgcggcgaccgacgacgggatcgagcgccacctgacgccgaccttg
gcctcgctcgtcgagcgcggccatctgacggtcgacgcggcgtgcggggaaggagcggtt
ccggttcatccggtacaagcgatgcggcttctcgccgatgcgctgagccgggtgcatgcc
ggggcgccgttcgagcaggtgatgcaggacccggtcgtgcaagacgtgctgacgcacgtg
tggaccggcgcgactgacgtcgaccggtttcagcgcgttctcgcggggctctgccatcgc
ccgcggccctggcgattgcctcccccatggattcgggctctgtacggcgatcccatccgc
gtgagcgtgagtcgactggagacgtacgccaagtgttcctatcggcatttcgctcagtat
gcgctccggctcgagccgctcgcgcttcagccggaagcggagcggagcgccggcacctgg
atccacgccgcggttcagctggcgacgcagcgattggcggaggactacccgcgcctttcc
gaacttggccacgcggagttggaggctgcccttctcgagatagctcatcaggcgctggaa
caggctgcgcaagcgacgaagttgcaagttacgctcgaacggccggatgtggccgtctac
gtaggggagcggcggcgccacttcgaattcgtcgtgcgggccatctggatgcagctctcg
cggggccaaatgcgtcccctctggctcgagaaagaatttcgcgatgtcgacgtgggcgag
tggaatggggcgcgcgtggtgctcgatggacggattgaccgcgtcgatcggctccaggcg
ggcgaggcggcgctatgcgtgtacgactacaagtcgtcggagacagcgcttcatccgtcc
aaggtgtatcaggggctgcagctgcaactcctgatctacgcagccatggccatgcgagag
gcggaggctgtcgaaggcgcgcctgtgagactgtatggcgcgttttacatgccgctcgtg
gcgaagcgggacgcccttgatgtcccgcctgaagagcgcgagggctctgcgcaactcggc
gcgtatcgggcgaaggggttcttcttgcgggaggaggcagcggttttgcgcgtgaacgag
gacctcgcgcctggccgaggttccgcgttgtacggcaggcagtttcgcgcagacggagcc
tgggcggcggatgcgaccgcctggcgcgacgacgagtggcaggtggtgctccgtcacgtt
gaacggcgggccgaggaagctgccaaagccatagcggagggtgaggtgcgcgtttcgccg
taccatctgagccacgtggacagcggctgtacgaattgcccctacaacgccttgtgccac
ttcgagcgcgcggatcacttcgacctgtaccgctctgtgccgaagctgaaattcgacgac
gtgatcgccggaggggatgcgaactga
DBGET
integrated database retrieval system
