Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_2232
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Entry
TC41_2232 CDS
T01821
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TC41_2232 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_2232 (ruvB)
Enzymes [BR:
aad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TC41_2232 (ruvB)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TC41_2232 (ruvB)
RecFOR pathway proteins
TC41_2232 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
DUF815
AAA_3
TsaE
nSTAND3
AAA_22
RNA_helicase
AAA_2
AAA_14
AAA_25
Parvo_NS1
Sigma54_activ_2
IstB_IS21
AAA_24
Bac_DnaA
bpMoxR
AAA_18
AAA_33
AAA_17
Rad17
NB-ARC
NACHT
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
AEJ44138
UniProt:
F8IFQ4
LinkDB
All DBs
Position
complement(2129354..2130352)
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AA seq
332 aa
AA seq
DB search
MDERLISAEWMREDAQLDTIRPRFLDDYIGQRAVVENLRIFIQAAKERGEPLDHVLLYGP
PGLGKTSLAMIIANELGVQIRVTSGPAIERAGDLAAILTNLQPGDVLFIDEIHRLSPSVE
EVLYPAMEDFAIDIVIGKGPSARSVRLDLPPFTLIGATTRAGLLSHPLRDRFGVMLHLDY
YPVRDLAEIVKRNARILQLAITEDGCAEIARRARGTPRIANRLLKRVRDIAQVAGWPEID
AARAAEALAQLHVDPLGLDATDKRILEAAMDKFGGGPVGLDTLAAAVGEEPSTLEDVYEP
YLLQIGFLKRTPRGRVVMPSAYRHLGRSVPSG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcgactgatttctgccgaatggatgcgcgaggacgcgcagcttgacaccatt
cgcccccgttttctcgacgattacatcggccagcgcgctgtcgtggagaacctgaggatc
ttcattcaggccgccaaagagcgcggagagccgctcgatcacgtcctgctgtacggtccg
cccggtctcggcaagacgtctcttgcgatgatcatcgccaacgagctcggcgtccaaatc
cgtgtgacctccggtccggccattgagcgcgccggcgatctcgcggccatcctgacgaat
ctgcagccgggcgacgtgctgttcatcgacgagatccaccgcctgtcgccgagcgtcgaa
gaggtcctctatccggctatggaggactttgcgattgacatcgtcattggcaaaggtccg
agtgcccgctccgtgaggctggaccttccgccgttcacgctgattggcgccacgacccgc
gcggggctcctgtcgcaccccctgcgcgatcgcttcggcgtgatgctgcatctggactac
tacccggtgcgcgatctcgccgagatcgtcaagcgcaatgcgcggattctgcaactggcc
atcacggaggacggatgcgccgagattgcccgccgagcgcgaggaacgccgcgcatcgcg
aaccggctgttgaagcgggtgcgcgatatcgcgcaggtcgcaggctggccggaaattgat
gcggcgcgggccgccgaggcgctcgcgcaactgcacgtggatcccctggggctcgacgcc
accgacaagcggattctagaggcggcgatggacaaattcggcgggggccctgtcgggctc
gacacgctcgcggccgcagtcggcgaggagccgtcgacgctggaggacgtgtacgaaccg
tacttgcttcaaattggcttcttgaagcggacgccgcgcgggcgcgtcgtcatgccgtcc
gcctatcgccacctggggcgctccgtgccttcaggctga
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