Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_2480
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Entry
TC41_2480 CDS
T01821
Symbol
exoX
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TC41_2480 (exoX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_2480 (exoX)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
TC41_2480 (exoX)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AEJ44379
UniProt:
F8IH25
LinkDB
All DBs
Position
complement(2353868..2354572)
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AA seq
234 aa
AA seq
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MRLSEARFVVIDTETTGLPPEGRVVELALVEVGLDREPQIVYSALVDPGCPIPPEASAVH
HLTDRDVVGKPSLSQIWPKVMRYIEGAILVAHNAEFDRGMLPETGRPWICSKRLAQHLWP
DAPRHSNQVLRYWLGIDVEVGNPHRALGDAIVTAHVFQRELQAYLEAGYPDDVEALIAFA
ESPIEVQTMPFGKHKGMPLKDVPLDYLDWALRNLQDLSPDLRWSMQKALEQGLG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgagattgagtgaagcgcgttttgtcgtaatcgacactgagacgaccggccttccaccc
gaaggccgcgtcgtcgaacttgcgctggtcgaggtgggactggaccgcgagccgcagatc
gtgtactcggcactggttgatcccggttgcccgatccctcccgaagcttcggcggtgcat
cacctgacggatcgcgacgtcgtaggaaagccgagcttgtcgcagatctggcccaaggtg
atgcggtacatcgagggagcgatcctcgttgcgcacaacgccgagttcgatcgtgggatg
ctgccggagacgggtcgaccgtggatctgctcgaagcgtctggcgcagcacttatggccc
gacgcaccgcggcactcaaaccaggtgttgcggtactggctcgggatcgatgtggaagtg
ggaaatccgcaccgggcgctcggcgacgcgatcgtgacggcgcatgtgttccaacgggag
cttcaagcgtatctggaggcggggtatccggatgatgtggaagccttgatcgcgtttgca
gagtcgcccattgaggtgcagacgatgccgttcggaaagcacaagggcatgccgttgaaa
gacgtgccgctggactatctcgactgggcgttgcgcaatttacaggacctttcaccggat
ttgcggtggagcatgcagaaggcgctggagcagggtttggggtga
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