Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_2557
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Entry
TC41_2557 CDS
T01821
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TC41_2557 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_2557 (xthA)
Enzymes [BR:
aad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
TC41_2557 (xthA)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TC41_2557 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF2709
Motif
Other DBs
NCBI-ProteinID:
AEJ44452
UniProt:
F8IHH9
LinkDB
All DBs
Position
complement(2418067..2418849)
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AA seq
260 aa
AA seq
DB search
MKFVSWNVNGLRACVNKGAFLPYFESVDADVFCVQETKLQAGQIQLPIGEAYQQFWNYAE
RKGYSGTAVFTRMPPLDVRYGFGNGVDPEGRIITLEFPSFYVVTVYTPNAKRDLSRLPYR
LEWEDAFRAYLCALDREKPVIACGDLNVAHQEIDIKNAKSNRGNSGFTDEERAKMTELLD
AGFVDTFRALYPDVTDKYTWWSNMPRVRERNIGWRIDYFLVSERLRDCILDARIDDHVLG
SDHCPVVLEMALEAWKDSGK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
ttgaagttcgtatcgtggaacgtgaatgggcttcgcgcctgcgtgaacaagggcgcattt
cttccgtatttcgagtccgtcgatgccgacgtgttttgcgtgcaggagacgaagctgcag
gcgggacagatccagcttcccatcggcgaggcataccagcaattctggaactatgcagag
cgaaagggctactccggcacggccgtgttcacgcgcatgccgccgctcgacgttcgctac
gggttcggcaacggcgtcgatccggagggccggatcatcacgctcgaattcccgtcgttt
tacgtggtgacggtgtacacgccaaacgcgaagcgggacctgtcgcgcctgccgtatcgc
ctggaatgggaagacgcgtttcgcgcgtatctctgtgcgctggaccgagagaaacccgtt
atcgcgtgcggggatctcaacgtggcgcatcaggagatcgacatcaaaaacgcgaaatca
aatcgcggcaactcgggattcaccgacgaagaacgggccaagatgaccgaacttctcgac
gcagggtttgtcgacacctttcgcgcgctgtatccggacgtgacggacaaatacacgtgg
tggtcgaacatgccacgtgtgagggagcggaacatcggatggcggatcgactatttcctg
gtcagcgagaggctgcgggattgcatcctcgacgctcgcatcgacgatcacgtcctcggg
agcgatcactgcccggtcgtgttggagatggcgcttgaggcgtggaaggattcgggtaag
taa
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