Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_2627
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Entry
TC41_2627 CDS
T01821
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TC41_2627 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_2627 (mutM)
Enzymes [BR:
aad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TC41_2627 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TC41_2627 (mutM)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TC41_2627 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Zn_ribbon_TFIIB
Zn_ribbon_IS1595
DUF8512
Lar_restr_allev
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AEJ44522
UniProt:
F8II42
LinkDB
All DBs
Position
complement(2485681..2486538)
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AA seq
285 aa
AA seq
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MPELPEVETVRRHLAELIEGDVILDVAVRLSRIVRHPSPSLFVERLKDRSICRVERRGKY
LLFELDGVLLVSHLRMEGRYTVADPAEPELPHTHVVFRLASGRELRYADVRQFGTMDAVL
EGEPLPKGLAELGPEPFDPALCGAVLRHRWRGRRAPLKSLLLDQRQIAGLGNIYVDEALF
AAGLHPLTPAGAVGAETLDVLLREIRAVLARAIREGGSSVRSFRDGYGRHGGFQIQLAVY
GREGKPCPRCGGAIQKIKVAGRGTHVCPACQPISVAAPKGTGVNA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaattgcccgaggtggagactgtccgacgccatctcgcggagctcatcgagggg
gatgtgatcctcgacgtggcggtccgcctgtcgcgcatcgtgcgccatccttcgcctagc
ctttttgttgagcggctcaaggatcggagcatttgccgcgtggagcggcggggcaagtat
ttgttgttcgagttggatggcgtgcttctcgtctctcacctgcgcatggagggccgttac
accgtggcggatccggctgaaccggagcttccgcacacccatgtggtgtttcgcctcgcg
tcgggccgtgagttgcgttatgcggacgtgcgccagttcggcacgatggatgccgtcctc
gaaggcgagccgctgcccaaagggctggcggagcttggaccggagccgttcgatccggcg
ctctgcggcgcggttcttcgacatcgctggcggggtcgccgcgcccctctcaagagcctg
ctgctggatcagcggcagattgcagggctcggcaatatctacgtggatgaagcgctgttt
gccgcggggcttcacccactgacgcctgcgggggcagtgggcgcggaaacgcttgacgtc
ctccttcgcgagatccgcgctgtcctcgcgcgcgccatccgggagggcggatcgtcggtt
cgatcgtttcgcgacggctatggccggcatggcggttttcagattcaactggcggtctac
gggcgcgaaggcaagccctgtccgcgttgtggcggagcaattcagaagatcaaggtggcg
ggccgtggcacgcacgtgtgtccggcgtgtcagcccatctccgtcgccgcaccgaaagga
acgggggtgaacgcgtga
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integrated database retrieval system
