Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_2629
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Entry
TC41_2629 CDS
T01821
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03030
DNA replication
aad03410
Base excision repair
aad03420
Nucleotide excision repair
aad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TC41_2629 (polA)
03410 Base excision repair
TC41_2629 (polA)
03420 Nucleotide excision repair
TC41_2629 (polA)
03440 Homologous recombination
TC41_2629 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aad03032
]
TC41_2629 (polA)
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_2629 (polA)
Enzymes [BR:
aad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TC41_2629 (polA)
DNA replication proteins [BR:
aad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TC41_2629 (polA)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TC41_2629 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TC41_2629 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AEJ44524
UniProt:
F8II43
LinkDB
All DBs
Position
complement(2486554..2489208)
Genome browser
AA seq
884 aa
AA seq
DB search
MPASKLVLIDGNSILYRAFFALPPLTARDGTPTNAVYGFTTMILRLMSDEKPTHLAVAFD
KSKTTFRHADFAAYKGTRQETPDELVQQFPLARRTLEALSIPMIEIDQYEADDVIGTLAK
RAAEAGFDVRVVSGDKDLLQLVDSSIHVLLTRKGITEMEHFDEQAVARRYPGLKPAQVID
LKGLMGDPSDNIPGVPGVGEKTALKLLASFGTVEGVYEHLDEVQGQKLRERLEQHREDAF
LSKRLATIACDAPIEVDLEALRYEGPDPARAIAWFRELDFRSLVDKISEEMSHDSTAAPS
PADARSASSEWSSFAYSLIEDAGSWKEIVSSFSEPVGVMMDLADPDYHRAEIRGMAVATP
KRAYYVRFGERLELSDVRPWLVSDRPKVAFDLKSMAFALDAHGIGLTSASGWQDVKLAAY
LLNPQDGEVELSDVFARERGQELPALEEGEREKWLAYTASQLPPLFESLAYTIRMQEMER
LYQEVELPLAFVLAKMEITGFYVNREKLVAFGQELTERIKRITEEIYDLAGTSFNLNSPK
QLGEILFDKLGLPALKKTKTGYSTSADVLEKLAPMHEIVQKILDYRLLAKLQSTYVEGLL
KVIRKETGRVHTRFHQTLTATGRLSSSEPNLQNIPIRLEEGRRLRQVFEPTYKDWVIFAA
DYSQIELRILAHLSGDEALIDAFRRDMDIHTRTAADVFEVPPEQVTSLMRRQAKAVNFGI
VYGISDFGLAQNLNIPQKEAKRFIESYFEKFPGVKRYMDEIVKQARERGYVTTLMNRRRY
LPDIHSRNYQLRSFAERTAMNTPIQGSAADLIKLAMVRIDRAMRDAQMDARMLLQVHDEL
IFECPKDELAALEVLVRDNMENAMTLSVPLKVDTAYGPTWYDAK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgtcgaaactcgtgttgattgatggaaacagcatcttgtatcgagcgttcttc
gccttgccgccgctcaccgcgagggacggcacgcccacgaacgccgtgtacggctttacg
acgatgatcttgcggctgatgtcggacgaaaaaccgacgcatctggccgtcgcgtttgat
aaatctaagacgacgtttcgtcatgctgattttgcggcgtacaaagggacgcgccaggag
acgcccgacgagctcgtgcagcagtttccgctcgcgcggcgcacgctggaggcgctgtcc
atcccgatgatcgagatcgaccaatacgaggccgacgacgtgatcggaacgctcgccaag
cgtgcagcggaagctggctttgacgtgcgcgtggtctcgggcgataaggacctgttgcag
ttggtcgacagtagcattcacgtgctcctgacgcgaaagggcatcacggagatggagcac
tttgacgagcaggccgtcgctcgccgttatccggggcttaagcccgcgcaggtcatcgac
ctgaagggtctgatgggcgatccgtccgacaacattccgggcgtgcccggggtgggcgaa
aagacggcgctcaagctgcttgcgtcctttggcacggtggaaggcgtgtacgagcacctg
gatgaggtccagggccagaagctgcgagagcgcctcgagcagcaccgcgaggacgcgttc
ctctccaaacgcctcgctaccatcgcctgcgatgcgcccatcgaggtggatctcgaggcg
ctgcgatacgaaggaccggatcccgcccgcgccatcgcctggttccgcgagctcgacttc
cgatccctcgtcgacaaaatttccgaggaaatgagccacgattcgacggcggctccttca
ccggcggacgcgcgtagcgcgtcgagcgagtggagctccttcgcgtacagcttgattgag
gatgcggggagctggaaggaaattgtatcgtcgttcagtgaaccggtcggcgtcatgatg
gacttggcagatccggactatcaccgggcggagatccgcggcatggccgtcgcgacgcca
aaacgcgcgtactatgttcgcttcggcgagcgattggagttgagcgatgtccgaccgtgg
ctcgtgtcggatcggccgaaggtggcgttcgacctgaagtcaatggcgttcgcgctggac
gcacacggcatcgggctgacgtcggcaagcgggtggcaggacgtcaaattggccgcgtac
ttgctcaatccgcaggacggcgaggtcgaactgtccgatgtcttcgcccgcgagcgtggg
caggagttgcccgcgttggaagagggcgagcgcgagaagtggctcgcctacaccgcgtct
caactgcctccgctcttcgaatcgttggcgtacacgattcgcatgcaggagatggagcgt
ctttaccaagaggtcgagcttccactggcgttcgtactcgcgaagatggagatcacgggg
ttttacgtcaatcgcgagaaactggtggcgtttgggcaggaattgacggagcggatcaag
cgcatcaccgaggagatctacgatctcgcaggcacttcgttcaatctgaactcgccgaaa
caactcggcgagatcctgttcgacaagctggggctgccggccttgaagaagacgaaaacc
ggctactccacgagcgccgacgtgcttgaaaagctggccccgatgcacgagattgtgcag
aagatcttggattaccgcttgctggcgaagttgcagtcgacgtacgtcgagggcctgctg
aaggtcattcgcaaggagacgggccgcgtgcacactcggtttcatcagacgctcacggcg
accggcagactgtcgagcagcgagcccaatctgcagaacatccccatccggctcgaggaa
gggcgcagactgcgccaggtgttcgagccgacgtacaaagattgggtgatcttcgcggcc
gactattcacagatcgaattgcggatcctcgcccatctgtctggcgatgaggcgctcatc
gacgcatttcgccgcgacatggacatccatacgcggacggccgcggacgtgtttgaggtg
ccgccggagcaggtgacgagcctgatgcgccgtcaggcgaaagcggtcaatttcggtatc
gtatatgggatcagcgattttgggctcgcgcagaacctcaacattccgcagaaagaggcg
aagcgcttcatcgagagttattttgagaagtttccgggtgtcaagcgatatatggacgag
atcgtcaagcaggcgcgcgagcgcggctatgtcaccaccctgatgaaccgcaggcggtat
ctgccggacatccacagccgcaactatcagctccgaagtttcgccgagcgcaccgccatg
aacacgcccatccagggcagcgccgcggatttgatcaaactcgcgatggtgcggatcgat
cgcgccatgcgcgacgcgcagatggacgcgcgcatgttgctccaggtgcacgacgagctc
atcttcgagtgcccgaaggacgaactggccgcgctcgaagtgctggtccgggacaacatg
gaaaacgcgatgaccttgtctgtgccgctcaaggtggatactgcgtacggcccgacgtgg
tacgacgccaagtga
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