Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_2640
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Entry
TC41_2640 CDS
T01821
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03030
DNA replication
aad03430
Mismatch repair
aad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TC41_2640 (dnaE)
03430 Mismatch repair
TC41_2640 (dnaE)
03440 Homologous recombination
TC41_2640 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aad03032
]
TC41_2640 (dnaE)
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_2640 (dnaE)
Enzymes [BR:
aad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TC41_2640 (dnaE)
DNA replication proteins [BR:
aad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TC41_2640 (dnaE)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TC41_2640 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
GerPB
Motif
Other DBs
NCBI-ProteinID:
AEJ44535
UniProt:
F8II55
LinkDB
All DBs
Position
complement(2499471..2502449)
Genome browser
AA seq
992 aa
AA seq
DB search
MDFVHLHVHSAFSFRESLLRVEDIVRAAKVCEMSAVAITDTNAMYGALSFYRLARAEGLA
PILGMQVSLAVDEEEVVPGRAAESLDTVVVLAMGLSGYRRLTRLATSARWKRPVPHVTLR
ELAEYSDGLVVLCGGPESRLFDALARGEVEAAERRLLQVANAVPAGQLFVEVQDHGLRRE
REGLPSLMELARRYDLPLVATQDVRYLAREDAPWHRAYAQLARADAAERFATDEFHFATK
AEMEDRFANLPEALGRTAEIAEMCALDLPLHQVRMPRYATKDGRPAEEVLREAARAGATR
RYGAIAPEVEERLERELDVICRMGYADYFLVVADFIRYAHQQGISTGPGRGSAAGSLVAY
ALRITDVDPIRHKLLFERFLNPARVSLPDIDTDFEFERRGEVIRYVMEKYGRDRVAQIGT
FGTLQARAALRDAGRMTGADPALADRLAKLVPGVVHASLDGAYQESAAFRELVDGSPDAR
RLFEAAKRIEDLPHHTSIHAAGVIISPEPIADWIPLDLAADDTPVTAYPMEDVEALGFVK
MDFLGLKTLTLIDRCLESIRKRTGASIDWRQVDEGDKATYALLTRADTNGVFQLESAGMR
RVLRELRPTSLDDVIAVISLNRPGPMENIPAFCDAKHGRRPVTYPHPDLEPILADTYGVI
VYQEQIMQIASRMAGFSLAEADLLRRAVSKKKREILDEERARFVDGCVRRGYSEETAREV
YDLIVRFADYGFNRSHAAAYAVLAFRTAYLRAHFLPDFLAALLTLSMGSPDKIRLYEQDA
RRHGIQVRPPSVLRSERGYTVEKDGSLRAGLISIRHVGEAAVDHILSLRSEKPFTSLVDF
LRRIEPRIVNRKALDSLFAAGALDEFFPENASRDVRRQMYEEALSRAEESRQWAALDLFV
EAEAQCASEGPGNARAPSAKRLYIRYRSRGGAQVLREIQRLLAMSPGETEVALYDASTGR
ARLLGPRYRVEVTQDLVAALEERVGLGNVRLK
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
gtggactttgtgcacctgcacgtccattccgcgttttcgtttcgcgagagcctgttgcgc
gtggaggacatcgtccgagccgccaaagtctgcgagatgtcggccgtggccatcacggac
accaacgccatgtacggggcgctcagcttctaccggctggcgcgcgcggaaggacttgca
cccatcctcggcatgcaggtgtcccttgccgtcgacgaggaggaggttgtgcccgggcgg
gcagccgaatcgctcgatacggtcgtggtgctcgccatgggcttatcgggctaccgccgg
ctcacgcggcttgcgacgagcgcgcgctggaagcggccggtgccgcacgtgacgctccgc
gaactcgccgagtattcggatgggctggtggtgctctgcggcgggccggagtcgcgcctg
ttcgatgctcttgcgcgcggcgaggtggaggcggccgagcggcggcttttgcaggtggcc
aatgccgtgcccgcggggcagttgttcgtggaagtgcaagatcacggccttcggcgagag
cgcgagggattgccttcgctcatggagctcgccaggcgctacgatctgccgcttgtggcg
acgcaagacgtccgctatctcgcgcgtgaggacgcgccgtggcaccgcgcgtacgcgcag
ctcgcgcgggcggatgcggccgagcggttcgcgacggacgagtttcactttgcgacgaag
gcggagatggaagaccggttcgccaacttgccggaggccctcgggcggacggccgagatc
gccgagatgtgcgcgctcgacctgccgcttcatcaggtgcggatgccgcgctacgcgacg
aaggacgggcggccggcggaggaggtgctgcgcgaggccgcgcgcgcgggcgccacgagg
cggtacggggccattgcgcccgaggtggaggagcggctcgagcgggagcttgacgtcatc
tgccgcatgggctacgccgattactttctcgtggtggcggacttcatccggtacgcgcac
cagcagggcatctccacggggccggggcgcggatcggcggcgggcagcctggttgcctac
gcccttcgtatcacggacgtggatcccattcggcacaagcttctgttcgagcggtttctg
aatcccgcgcgcgtgtcgctgccggacatcgacacggacttcgagtttgagcggcgcggc
gaggtcatccgctatgtgatggagaagtacgggcgcgatcgcgtcgcgcagatcggcacc
ttcggcaccctgcaggcccgggcggccttgcgggacgcgggccgcatgacgggggcggac
ccggcgctcgccgaccgcctggcgaagctcgtgccgggcgtggtgcacgcgtcgctcgac
ggcgcctatcaggagtccgcggcgttccgggagctcgtcgacggcagtccggatgcccgg
cggctgtttgaggcggcaaagcggattgaggatctgccgcaccacacgtccatccacgcg
gccggcgtcatcatctcgccggagcccatcgcggactggattccgctcgatctcgccgcg
gacgacacgccggtcacggcgtatccgatggaggacgtggaggcgctcgggttcgtcaag
atggattttctcggcctcaagacgctgacgctcatcgatcgctgcctcgagtcgattcgc
aagcgcacgggcgcgtccatcgactggcggcaggtggacgagggcgacaaggccacgtac
gccctgctgacccgcgcggataccaacggcgtctttcagctcgagtcggccggcatgcgg
cgggtgttgcgcgagcttcgccccaccagcttggacgacgtgatcgccgtcatctcgctc
aaccggccggggccgatggaaaacatccccgctttttgcgacgcgaaacacgggcgccgc
cccgtgacgtatccgcacccggatctcgagcccattctggcggatacctacggcgtcatc
gtgtatcaggagcagatcatgcagattgcgagccggatggcgggattttcgctggccgag
gcggatctgttgcggcgggccgtatcgaaaaagaagcgcgagatcctggacgaggagcgc
gcccgctttgtcgacgggtgcgtgcggcgcgggtacagcgaggagacggcgcgcgaggtg
tacgatctcatcgtgcgcttcgcggattacgggttcaatcgctcgcacgcggcggcgtat
gcggtgctcgcgtttcgaactgcgtatctgcgggcgcattttctgccggattttctggcg
gcgctcctcacgctctcgatgggatcgccggacaagatccggctgtacgagcaggacgcg
aggcgccacggcatccaggtgaggcccccttccgtcctgcggagcgagcgcggatacacc
gtggagaaggatgggagcctgcgcgccgggctcatctccattcgacacgtcggggaggcg
gcggtcgatcacatcctgtctctcaggtccgagaagccgtttacgtcgctggtcgatttc
ctgcggcgcatcgaaccccgcatcgtcaatcgcaaggcgctcgacagcctctttgcggcg
ggggcgctcgacgagttcttcccggagaacgcctcgcgcgacgtgcgccgccagatgtac
gaggaggcgctgtcgcgcgcggaggagagccgccagtgggcggcgctcgacctgttcgtc
gaggcggaggcgcagtgcgcttccgaggggcccgggaacgcacgagccccatccgccaag
cgcctgtatatccggtatcgcagtcggggcggcgcgcaggtgttgcgggagatccagcga
ctgctcgccatgtctcccggggagacggaggtcgcgctctacgacgcctccacgggccgg
gcgcggctgctcggcccgcgctatcgcgtagaggtgacgcaggatttggtcgctgcgctc
gaagagcgcgtggggcttggcaacgttcggctgaagtga
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