Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_2757
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Entry
TC41_2757 CDS
T01821
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03030
DNA replication
aad03430
Mismatch repair
aad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TC41_2757
03430 Mismatch repair
TC41_2757
03440 Homologous recombination
TC41_2757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aad03032
]
TC41_2757
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_2757
Enzymes [BR:
aad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TC41_2757
DNA replication proteins [BR:
aad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TC41_2757
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TC41_2757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEJ44650
UniProt:
F8IJD7
LinkDB
All DBs
Position
complement(2617697..2618302)
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AA seq
201 aa
AA seq
DB search
MPVWERPLGEAPYFVLDLETSGFSPVRDKILSVACATFSGWRSEPDESFYAIVRHDDIAD
VPPHIWELTGLTPQAVRDGEPLEAALRRALELGAGRVWVAHHVRHDLGFLQRATDALWRL
RLRPIAMDTAVVAQVLARAARPLTLDEACEWLGIPVVGRHQADADVRMTAAVWRKEMELC
GRLGLQTVKDVIDWVSARATG
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
gtgccggtctgggagcggcccctcggcgaagcgccctactttgtgctcgacctcgagacg
tctggcttttcccctgtgcgcgacaagatcctctcggtcgcctgtgccacgttttccggg
tggcgaagcgagcctgacgagagcttctacgccatcgtgcgccatgacgacatcgcggac
gtccccccgcacatttgggagctgaccggcctcacgccacaggccgtgcgggacggcgag
ccccttgaggcggcgcttcgccgcgcgctggagctcggcgcaggccgcgtctgggtggcc
caccacgtccggcacgatctcggctttctccagcgcgcgacggacgcgctgtggcggctc
cggctgcggcccatcgcgatggacacggcggtcgtggcccaggtgctggcgcgggccgcg
aggcccctgacgctcgacgaggcctgcgaatggctcgggatcccggtggtcggccgccac
caggcggatgcggacgtgcgcatgaccgcggccgtctggcgcaaggaaatggagctgtgc
gggcggctcgggctgcagaccgtgaaggacgtgatcgactgggtgagcgcccgtgccacc
gggtga
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