Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_3012
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Entry
TC41_3012 CDS
T01821
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TC41_3012 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aad03021
]
TC41_3012 (rpoA)
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_3012 (rpoA)
Enzymes [BR:
aad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TC41_3012 (rpoA)
Transcription machinery [BR:
aad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TC41_3012 (rpoA)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TC41_3012 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AEJ44898
UniProt:
F8ILE4
LinkDB
All DBs
Position
complement(2859683..2860621)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEIEKPRIEIVEQTGDYGKFVCEPLERGYGTTLGNSLRRILLSSIPGAAVRSVKIEGVL
HEFSTIPGVVEDVTEIILNLKRLSLKIHSDEEKTLIIDAVGPGVVTAGDIRADSDVDIMN
PDLHIATLTEGARIYMEMRAGRGRGYVPAHRNKPEEQEIGLIPIDSLYSPISRVNFSVEN
TRVGQITDYDKLTLEVWTDGSVAPDEAVSIGAKILTEHLMLFVGLTDRARDTDLMVEKEN
AHNDKILDMPIEELDLSVRSYNCLKRAGINTVAELCAKSEEEMMKVRNLGRKSLEEVVEK
LHALGLSLRKDD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagatagagaagccgcggatcgagattgtggagcaaaccggcgactacgggaag
ttcgtgtgcgaaccgctggagcgcggctacgggacgacgctcggcaactcactgcgccgc
atcctgttgtcttctatcccgggggcagcggtgcggtcggtgaaaattgagggcgtgctg
cacgagttctccacgattcctggagtcgtcgaggatgtcaccgagatcattctcaatctc
aaacggctctcgttgaaaattcattccgacgaggagaagacgctgatcatcgacgccgtg
ggcccgggagtggtgacggctggcgacatccgcgcggattcggacgtcgacatcatgaat
cctgacctgcacatcgcgacgctgaccgagggcgcgcgcatctacatggagatgcgcgcc
ggccgggggcgcggatacgtgccggcacaccgcaacaagccggaggagcaggagattggg
ctcattcccatcgactcgctgtactcgcccatctcgcgcgtgaacttctctgtggagaac
acgcgcgtgggtcagatcacggactacgacaaactcacgctcgaggtgtggacggacgga
agcgtggcgccggacgaggcggtctcgatcggagcaaagattctgacggaacacttgatg
ctgtttgtcggtctgacggatcgggcgcgggacacggatctcatggtcgaaaaggagaac
gcgcacaacgacaagatcctcgacatgccgattgaggagctagacctgtcggtgcgctcg
tacaactgcctgaagcgcgcgggcatcaacacggtggcggagctctgcgcgaagtcggaa
gaagagatgatgaaggtccgcaacctcggccggaaatcgcttgaggaagtggtcgagaag
ttgcatgcccttgggcttagcttgcgcaaggacgactga
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