Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1: TC41_3126
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Entry
TC41_3126 CDS
T01821
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
aad
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1
Pathway
aad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TC41_3126 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aad03021
]
TC41_3126 (rpoE)
03400 DNA repair and recombination proteins [BR:
aad03400
]
TC41_3126 (rpoE)
Transcription machinery [BR:
aad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TC41_3126 (rpoE)
DNA repair and recombination proteins [BR:
aad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TC41_3126 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
IATP
Motif
Other DBs
NCBI-ProteinID:
AEJ45009
UniProt:
F8ID04
LinkDB
All DBs
Position
complement(2945346..2945888)
Genome browser
AA seq
180 aa
AA seq
DB search
MAISLARTEHEIQEMPLVELVYEILKARKEPMYFRDIMKEIQELRHMTDEQVAEVIARVF
TEINVDGRFVCIGHNVWGLNRWYPTDRNAERLSGGKKFIRKTGDAFGDEEDDEEEYEEED
VLEDDELDYGEVEAMDEEPDFDDVEVVEDEDEILPEDEYDDAPLFDEDEEVEEDEEDEED
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggccatctcattggcacgaacggaacacgagatacaggaaatgcctctcgtggagctc
gtgtacgagatcttgaaagctcgaaaagagcccatgtacttccgcgatatcatgaaggaa
atccaggaacttcgccacatgaccgacgagcaggtggcggaggtcattgcgcgggtattc
acagagatcaacgtcgatggccggttcgtctgtattggtcacaatgtgtgggggttgaat
cgttggtatccgacggatcgcaacgccgagcgcctgtccggtgggaagaagttcatccgc
aagacgggtgacgcgtttggcgatgaggaggacgacgaagaagagtacgaggaggaggac
gtcctcgaggacgacgagctcgactacggcgaggtcgaggcgatggacgaggagcccgac
ttcgacgacgtcgaggtcgtggaagacgaggacgagatcctcccagaagacgaatacgac
gatgcgccgctgttcgacgaagacgaggaagtcgaggaagacgaggaagacgaggaggac
taa
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