Aquifex aeolicus: aq_032
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Entry
aq_032 CDS
T00013
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
aae
Aquifex aeolicus
Brite
KEGG Orthology (KO) [BR:
aae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aae03016
]
aq_032
Enzymes [BR:
aae01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
aq_032
Transfer RNA biogenesis [BR:
aae03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
aq_032
Prokaryotic type
tRNA splicing ligases
aq_032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AAC06415
UniProt:
O66450
LinkDB
All DBs
Position
19620..21062
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AA seq
480 aa
AA seq
DB search
MGLKEKLIRKGKYIWELPKETIEGQRVPVILYLSDALFELLEEDALRQAANAATLPGVEK
AIYVMPDVHVGYGFPVGGVMATNTETGIISPGSIGYDINCGVRLIATNLKAVDVAPRIKE
IMNNMLKNVPAGVGSTSEIKLSKSQMKEVLVKGAGWAVEHGFGFPEDLQHIEGFGALPNA
DPEKASHEAYERGSDELGTVGSGNHFVEVQAVEQIYEPEIAEKLGIWEGQVMVMVHSGSR
GFGHQVCTDYLRVALKVRDKYKIKLPDPQLACMPFNSPEGQAYFKAMNAAANYAFANRQI
LGFKAANTVRKTLGISWEEFGYRLIYDHAHNIGKVEKHEVDGKKVEVIVHRKGATRAFPP
YNPEVPPAYREVGQPVIIPGDMGRASFLLVGQTNSMKMSFGTACHGAGRVMSRRQAKKYV
KEVGLEKVIGNLVVVARGKGTIMEEIPQAYKDVTEVVRVIDELGIAKAVARLKPLGTLKG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggactgaaggaaaaacttatcagaaaaggtaaatacatatgggaactgccaaaagaa
acgatagaaggtcaaagagtacccgtaattctttacctgagcgacgccctctttgaactc
cttgaagaagatgccctaagacaggctgcaaacgccgcaactcttccgggagtggaaaag
gctatttacgtgatgccggacgttcacgtggggtacggctttcccgtgggaggggtaatg
gccacgaatacggaaacaggtataataagtcccggttcaatcggttatgacatcaactgc
ggtgtccgtctaatagcgacaaacttaaaagcggtggatgtagcacccagaataaaggaa
ataatgaacaacatgctaaaaaacgttcccgcaggtgttggctccacgagcgagataaaa
ctctctaaatcccagatgaaggaagtgctcgtaaagggagcaggctgggcggttgaacac
ggctttggttttcccgaggatcttcagcacatagagggcttcggtgctcttccgaacgca
gatcccgaaaaggcttctcacgaggcctacgagaggggttcggacgaactcggaactgtc
ggaagcgggaaccactttgtggaagttcaggcggtagaacagatatacgagcctgaaatt
gcggaaaagctcggtatatgggaaggacaggtaatggttatggttcactctggttcgagg
ggtttcggtcatcaggtctgcacggattacctcagggtagccttgaaagtgagggataag
tacaaaatcaaactccctgatccccaacttgcgtgtatgcccttcaactctcccgaagga
caggcttacttcaaggctatgaacgccgcggcaaattacgcctttgcaaacagacagatc
ctcggttttaaagctgcgaacacggtcaggaaaactctcggcatttcgtgggaagagttc
ggctacaggctcatatacgatcacgctcacaatataggaaaggtggaaaaacacgaagta
gacggaaaaaaggtcgaagtaatagttcacaggaaaggggcaacgagagcttttcctcct
tacaaccccgaagttccccccgcttacagggaagtaggacaacccgtgataattccggga
gacatgggaagggcttccttcctgctcgtgggacagaccaactctatgaagatgtccttc
gggactgcgtgccacggcgcgggaagagttatgtcaagaagacaggcaaagaagtacgta
aaagaagtaggacttgaaaaggtaataggtaacctcgtagtagttgcaaggggtaaagga
acaataatggaagaaatcccccaggcgtacaaggacgtgacggaagtcgtaagggttata
gatgaactgggaatagccaaagcggtggctaggttaaaacccctcggaacgctaaagggt
taa
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