Aquifex aeolicus: aq_070
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Entry
aq_070 CDS
T00013
Symbol
rpoA
Name
(GenBank) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aae
Aquifex aeolicus
Pathway
aae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
aq_070 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aae03021
]
aq_070 (rpoA)
03400 DNA repair and recombination proteins [BR:
aae03400
]
aq_070 (rpoA)
Enzymes [BR:
aae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
aq_070 (rpoA)
Transcription machinery [BR:
aae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
aq_070 (rpoA)
DNA repair and recombination proteins [BR:
aae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
aq_070 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Ribosomal_TL5_C
RAD51D_N
AF1548-like_C
DUF7443
Motif
Other DBs
NCBI-ProteinID:
AAC06440
UniProt:
O66483
LinkDB
All DBs
Position
complement(44863..45816)
Genome browser
AA seq
317 aa
AA seq
DB search
MLNEFIYPDKIFWEEKTDTYGRLVVEPLERGFGTTVGNSLRRVLLSSISGTAITAVKIYG
IYHEFSAIEGVQEDAIELIANLKKIKFLMKGDSDVEILYLQKKGEGEVKASDIKTPPNVE
ILNPDQYIATITDPNKELNIEIRVERGRGYVPVEEMEAIGEVGWILVDADFSPVKKVGFR
VDNVRVGKKSTYERLTLEIFTNGIKTPDQCMQEAIEILKKHYELLENIFTEKPTVPQKVA
VDELAEKLSLSIEELDISQRALNSLKRIGITTIGDLVRMTEDELKSTKNIGRKALAEIKE
ALHKLGLELGMNIETQR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacgagtttatataccccgacaagatattctgggaagaaaaaacggacacttac
gggagactcgtagtagaaccgcttgaaaggggatttggcactaccgttggaaattctctg
agaagggttctcctctcttccattagcggaactgccattactgcggtaaagatttacggt
atttaccacgagttttctgcgattgaaggcgttcaggaggacgcaatagaactcatagca
aaccttaaaaaaattaagtttttaatgaagggagacagtgacgttgaaatactttatctc
cagaaaaagggagaaggggaggtaaaggcgtccgatataaaaactcctccaaacgttgaa
atactcaatcccgaccagtacatagcaactataacggatccgaacaaggagcttaacata
gaaattcgtgtggaaaggggaagaggatacgttcccgtagaggaaatggaagctataggg
gaagtgggctggattctcgtggacgctgatttttctcctgtaaagaaggtaggtttcagg
gtagataacgtaagggtagggaaaaaatccacttacgaaaggcttacacttgaaatattc
acgaacggtataaaaactcccgaccagtgcatgcaggaagcaatagaaatactcaagaag
cactacgaactccttgagaacatatttacggaaaaaccgacagttcctcaaaaggtagcg
gtggacgaacttgcggaaaaactctccctctccatagaagaactcgacatatcccaaaga
gcacttaactccctcaagagaataggtataaccacaataggggaccttgtcaggatgacg
gaagatgagctaaaaagcactaaaaacataggaaggaaggcacttgctgaaataaaggaa
gcacttcataagcttgggcttgagctcggtatgaatattgaaactcagaggtag
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