KEGG   Aquifex aeolicus: aq_1484a
Entry
aq_1484a          CDS       T00013                                 
Symbol
himA
Name
(GenBank) DNA binding protein HU
  KO
K04764  integration host factor subunit alpha
Organism
aae  Aquifex aeolicus
Brite
KEGG Orthology (KO) [BR:aae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aae03032]
    aq_1484a (himA)
   03036 Chromosome and associated proteins [BR:aae03036]
    aq_1484a (himA)
   03400 DNA repair and recombination proteins [BR:aae03400]
    aq_1484a (himA)
DNA replication proteins [BR:aae03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    aq_1484a (himA)
Chromosome and associated proteins [BR:aae03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    aq_1484a (himA)
DNA repair and recombination proteins [BR:aae03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      aq_1484a (himA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_euk_1 HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_1 DUF531 HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: AAC07415
UniProt: O67461
LinkDB
Position
complement(1057616..1057900)
AA seq 94 aa
MTKKEIAEEIYDRLIRDYNVKIQKKEVYNLVSEVFTIIQECLLKGEKVKISGFGTFVVKT
RKPKKGMNIKKREIVEVPERKIVLFKPSKNFIKS
NT seq 285 nt   +upstreamnt  +downstreamnt
atgactaaaaaagaaatagcggaagagatttacgaccgccttataagggattacaacgta
aaaatacagaaaaaggaagtatataacctcgtctcggaagttttcactataattcaggag
tgtctcctaaaaggtgaaaaggtaaagatatccggcttcggtacctttgtagtaaaaaca
agaaagccaaagaaaggtatgaacataaaaaagagggaaatcgtggaggttcccgagagg
aaaatagtcctatttaaacccagtaagaacttcataaagtcatga

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