Aquifex aeolicus: aq_1484a
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Entry
aq_1484a CDS
T00013
Symbol
himA
Name
(GenBank) DNA binding protein HU
KO
K04764
integration host factor subunit alpha
Organism
aae
Aquifex aeolicus
Brite
KEGG Orthology (KO) [BR:
aae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aae03032
]
aq_1484a (himA)
03036 Chromosome and associated proteins [BR:
aae03036
]
aq_1484a (himA)
03400 DNA repair and recombination proteins [BR:
aae03400
]
aq_1484a (himA)
DNA replication proteins [BR:
aae03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
aq_1484a (himA)
Chromosome and associated proteins [BR:
aae03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
aq_1484a (himA)
DNA repair and recombination proteins [BR:
aae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
aq_1484a (himA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_1
DUF531
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AAC07415
UniProt:
O67461
LinkDB
All DBs
Position
complement(1057616..1057900)
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AA seq
94 aa
AA seq
DB search
MTKKEIAEEIYDRLIRDYNVKIQKKEVYNLVSEVFTIIQECLLKGEKVKISGFGTFVVKT
RKPKKGMNIKKREIVEVPERKIVLFKPSKNFIKS
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaagaaatagcggaagagatttacgaccgccttataagggattacaacgta
aaaatacagaaaaaggaagtatataacctcgtctcggaagttttcactataattcaggag
tgtctcctaaaaggtgaaaaggtaaagatatccggcttcggtacctttgtagtaaaaaca
agaaagccaaagaaaggtatgaacataaaaaagagggaaatcgtggaggttcccgagagg
aaaatagtcctatttaaacccagtaagaacttcataaagtcatga
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