Aquifex aeolicus: aq_657
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Entry
aq_657 CDS
T00013
Symbol
topA
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aae
Aquifex aeolicus
Brite
KEGG Orthology (KO) [BR:
aae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aae03032
]
aq_657 (topA)
03400 DNA repair and recombination proteins [BR:
aae03400
]
aq_657 (topA)
Enzymes [BR:
aae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
aq_657 (topA)
DNA replication proteins [BR:
aae03032
]
Prokaryotic type
DNA Topoisomerases
aq_657 (topA)
DNA repair and recombination proteins [BR:
aae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
aq_657 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
CpsB_CapC
Toprim_4
DUF7399
TraD_N
Motif
Other DBs
NCBI-ProteinID:
AAC06848
UniProt:
O66893
LinkDB
All DBs
Position
448782..450404
Genome browser
AA seq
540 aa
AA seq
DB search
MELFIVESPTKAKTIQKFLGKGFLVKATLGHVKDLPEKELGVDLRTLKAKYVYKRGKKKL
VEQLKKLSRRSSIVYLGTDPDREGEAIAYFLKKDLEKVNKNIKRAVFYEITPEAIRESIR
NAGDVNMNLVYAQFARRILDRLIGYLISPILWKEFKNYKLSAGRVQSPALRLIVEREREI
QNFKVKKYYYVKALLRKGSEEFWAIYDYRYENPSDAKIIAKKLEKGYFSVYKVEKKKEKV
SPPKPFITSDLQSEANAKFGFSSERTQKLAQELYEKGYITYPRTDSYRMNEKKAKEFMNY
IEKKYGKEYVGRLRRFREKATAQGAHECIRPTSLREEIPEREELRLLYDLIFRRTIASLM
KEMLLEREKVTVEAITPELKHPVYLVAKGLKIVFDGWSRVYPSEITEEKLPELYEGDLLD
LVKTTLEERKTQPPPRYTEGTLIKTLEKLGIGRPSTYATIVKTLKERGYVEVKKKALVPT
EIAFQVVEFLMERFPTLMDYKFTAQMEEKLDLVEEGKLNWKSVVYEFMEKIFGKELEMVR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggaactctttatagtggagtctccaacgaaggcaaaaaccattcagaagttcctcgga
aaaggcttcttagttaaagccacactgggacacgtaaaggatcttcccgaaaaggaactc
ggcgttgacctcagaaccctgaaggcaaagtacgtatacaaaaggggaaagaaaaaactc
gtggaacaactcaaaaaattgtcaagaaggtcaagtatagtctatctgggaacggacccc
gaccgtgaaggggaagccattgcctactttttaaagaaagatctcgaaaaggtaaataaa
aacataaagagagctgtcttttacgaaataacgccggaagccataagggaaagcataaga
aacgcgggcgacgtgaacatgaacttagtttacgcccagtttgcaaggaggatactcgac
agactcataggttacttaatatccccaatactctggaaggagttcaagaactacaaactc
tcggcgggaagagtgcagtcgcctgccctcagacttatagtggaaagggaaagggaaatt
cagaactttaaagttaagaagtattactacgtaaaggccttactcagaaaggggagtgaa
gagttttgggctatttacgattaccgctacgaaaacccctcggacgcaaaaatcatagcc
aaaaagctggagaagggatatttcagcgtttacaaagtggaaaagaaaaaggaaaaagtg
tcacctcccaagccctttataacctccgatctccagtcagaagcaaatgcaaagttcgga
ttttcgagtgagaggacacagaagttggctcaggaactctacgaaaagggatacataacc
tatcccagaacggacagctacaggatgaacgaaaaaaaggcaaaggaatttatgaactac
atagaaaagaagtacggaaaggaatacgtgggaaggttgaggaggttcagggaaaaggca
accgcgcagggtgcccacgagtgtatcagaccaacaagcctgagggaagaaattcctgaa
agggaagaattgagacttctttacgacttgattttcaggagaacgatagcgagtcttatg
aaagaaatgctcctggaaagggaaaaggttacggtagaggcgattacaccagaactcaag
caccctgtttacctcgtggcaaagggattgaaaatcgtctttgacggatggagcagagtt
tacccgagtgagataaccgaagagaaacttccagaactttacgaaggggatctattagat
ctcgtgaaaacgacacttgaggaaaggaagacccagccacctccgagatacacggaagga
actctcataaagacccttgagaaactgggaataggaagaccttccacctacgcaactata
gtgaaaacactgaaagagagagggtacgttgaagtaaagaaaaaagctttagtaccaacc
gagatagcctttcaggtcgttgaatttttaatggaaagatttcccacacttatggattac
aagtttaccgcccagatggaggaaaaactcgatctcgttgaagaaggaaagctcaattgg
aagtctgtagtttacgagttcatggaaaagatcttcggtaaggagttggaaatggtaaga
tag
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