Aquifex aeolicus: aq_873
Help
Entry
aq_873 CDS
T00013
Symbol
rho
Name
(GenBank) transcriptional terminator Rho
KO
K03628
transcription termination factor Rho
Organism
aae
Aquifex aeolicus
Pathway
aae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
aq_873 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aae03021
]
aq_873 (rho)
03019 Messenger RNA biogenesis [BR:
aae03019
]
aq_873 (rho)
Transcription machinery [BR:
aae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
aq_873 (rho)
Messenger RNA biogenesis [BR:
aae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
aq_873 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
AAA_25
ATPase_2
DUF3086
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AAC06989
UniProt:
O67031
LinkDB
All DBs
Position
603214..604524
Genome browser
AA seq
436 aa
AA seq
DB search
MTQQTAQQEQQKSEVKIYSREELKQKTLAELQKIGKELGLTRTTGLKKEELIEKILKAQL
EKSRLVFVKGVLEILPEGYGFLRMPENNYMPSWNDVYVAPSQIKKFGLRTGDTIEGFARL
PRENEKYKALIRMESVNGLPPDPEILKRRPQFEKLTPLHPMERFKLEYDPNELSTRVVSL
IAPIGKGQRGLIVAPPKAGKTVLLQKIAQAIIRNHPEVYLIILLIDERPEEVTEMRRIVK
DKAEVVASTFDEPPERHMQVAEIVVEKAKRMVELKKDVVILMDSLTRFTRASNAVTPPTG
RVLTGGIEITAFQRPKKFFGAARNIEEGGSLTIIATALVETGSKMDDVIYEEFKGTGNME
IHLDRRLMERRIFPAINIEKSGTRKEELLLEPWELQRIWVLRKFLSTMDPVEAMEFLLEK
LRRFKTNEEFLKAMNA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcaaaccgctcaacaagaacaacaaaagagtgaagtaaaaatttacagcagg
gaagagttaaaacaaaagaccttagcggagctccagaaaatcgggaaggagctcggactc
accagaaccacgggacttaaaaaagaggagttaatagagaaaatactaaaagctcagctc
gaaaagagcagactcgttttcgtaaaaggtgtcctcgaaattctccccgaaggctacggc
ttcttaaggatgccggagaacaactacatgccaagctggaacgacgtttacgttgccccc
tcccagataaagaagttcggactcagaacgggagatacgattgagggctttgcgagactg
cccagagaaaacgaaaagtacaaggcgttgatcagaatggaatccgtgaacggacttccg
cctgaccccgaaatactcaagagaagaccccagtttgaaaagctcacaccccttcacccc
atggaaaggttcaaactcgagtacgacccgaatgagctctccacccgtgtggtcagcctg
atagcacctataggtaagggacagagaggattaatagtagcacctccgaaggccggaaaa
acggttctcctccagaaaatagcccaagctattataagaaaccacccagaagtttacctc
ataattctcctgatagacgaaagacccgaagaagtcactgaaatgagaaggatagtgaag
gacaaggctgaagtagtagcatctacttttgacgaaccacccgaaaggcacatgcaggtt
gcggaaatagtcgtggaaaaggcaaagagaatggtagaactcaagaaagacgtagtaata
cttatggactccttgacaaggtttacgagagcttctaacgcggtgactcctcctacgggc
agagttctcacgggtggtatagaaatcacagccttccagagacctaaaaagttctttggt
gctgcgcggaacatagaagagggaggaagcctcaccataatcgcaaccgctctcgtagag
acaggttcaaagatggacgatgtaatctacgaagagttcaaaggaacgggtaatatggaa
atacacctcgacagaagactaatggaaaggaggatattccccgccataaacatagaaaag
tcaggaaccagaaaggaagaactccttttagagccctgggaactccagaggatttgggtt
ctcaggaagttcctgtcaacaatggaccctgtggaggctatggaattcctccttgaaaaa
ctgagaaggttcaaaacgaacgaggagttccttaaagccatgaacgcttga
DBGET
integrated database retrieval system
