Achromobacter aegrifaciens: RA224_00595
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Entry
RA224_00595 CDS
T09343
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
aaeg
Achromobacter aegrifaciens
Pathway
aaeg02020
Two-component system
aaeg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA224_00595 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RA224_00595 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaeg03021
]
RA224_00595 (rpoN)
Transcription machinery [BR:
aaeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RA224_00595 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
WLW61942
LinkDB
All DBs
Position
124915..126360
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AA seq
481 aa
AA seq
DB search
MQNIVPMTRPILELRPGQHLTLTPQLQQSIRLLQLSTLDLEAEISQVLAENPLLERQDEA
PSAEAPAESDRESSVQDDEPAAERETPVDEMPGSGGVYPDEDSSRPEAARPDTLREHLLG
QLMLTRAAPRDAALAGLLIDELDENGYLGSPLEEILDWLPPELEPDIDELKAALSLLQSF
DPPGIGARDMAECLLLQLRNPDLDRLPEAADAAVLACARQICAQHLALLATGNAARLCAA
VGCDEATFRSAHALILRLEPRPGRAWTVPAADYAVPDVIVRKTRGGWQVTLNSAAVPKLQ
INGLYAQMLGNQKESAHAGLQSQLQQARWMIRNVEQRFDTILRVAQAIVQHQTAFFSQGP
AAMRPLILKDIAGELGLHESTISRATTQKYMLTPFGTLELKRFFGTGVSTDGGDATSATA
VQTFIRQMVAEENRAKPLSDSQIMQKLADQGIVIARRTVAKYREALRIAPAALRKAQAAA
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatattgtacctatgacccgtccaattttagaactgcgaccaggtcagcatttg
acgctgacgccacaactacagcaatcgatccgattgttgcagctgtccacgctcgacctc
gaagccgagatttcgcaggtgctggcggagaatccgctgctggagcggcaggacgaagcg
ccgtcggccgaggcgccggccgagtccgaccgcgaatcctcggtgcaggatgacgagccc
gccgccgaacgcgagacgccggtggacgaaatgccgggctcgggcggggtctaccccgac
gaagattccagccgccccgaggccgcccggccggatacgctgcgcgaacatctgctgggc
cagctgatgctgacgcgcgccgcgccgcgcgacgctgcgctggccggcctcctgatcgac
gagctggacgaaaacggctacctgggatcgccgctggaggaaatcctggactggttgccg
cccgaactggaaccggacatcgacgagctgaaggcggccctgtcgctgttgcagtcgttc
gatccgcccggcataggcgcgcgcgacatggcggaatgcctgttgttgcagctacgcaac
ccggatctggatcggctgcccgaagcggcggacgccgcggtcctggcttgtgcccgccag
atctgcgcgcagcacctcgcgctgctggcgacgggcaacgccgcgcgcctgtgcgcggcc
gtgggctgcgatgaggccacgttccgctcggcccatgccctcatcctgcgcctggagccc
cgccccgggcgtgcctggaccgtgcccgcggccgactacgcggtgccggacgtcatcgtg
cgcaagacgcgcggcggctggcaggtcaccctcaacagcgccgccgtgcccaagctgcag
atcaacgggctgtacgcccagatgctgggcaaccagaaggaatccgcgcatgcggggctg
caatcgcagctgcagcaggcccgttggatgatccgcaacgtggagcagcgcttcgacacc
atcctgcgcgtggcccaagccatcgtgcagcaccagacggccttcttcagccaggggccg
gccgccatgcggcctctcatcctgaaggacatcgccggtgagctcggtttgcacgaatcc
accatttcacgggccacaacacagaagtacatgctcactccgtttggcacgctggagctc
aagcgcttctttggtacgggggtttcgacggatggcggggatgccacctcggccacggcg
gtgcagaccttcatccgccagatggtggccgaagagaaccgggccaagcctttgtccgac
agccagatcatgcaaaagctggctgatcaggggatagtcatcgcccgaaggacggtggca
aagtaccgggaagcgctgcggattgccccggcggcgttgcgcaaggcgcaggcggcagcc
cgctga
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integrated database retrieval system
