Achromobacter aegrifaciens: RA224_00960
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Entry
RA224_00960 CDS
T09343
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
aaeg
Achromobacter aegrifaciens
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaeg03021
]
RA224_00960 (rpoH)
Transcription machinery [BR:
aaeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RA224_00960 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_PafC
HTH_AsnC-type
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WLW62012
LinkDB
All DBs
Position
198391..199311
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AA seq
306 aa
AA seq
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MSLSLRHPETPAMKQPSTSLAATGNALALAIANPGALGTIDAYISSVNRLPVLSAERETE
LGRRLRDQEDLGAARELILSHLRLVVSVARQYLGYGLPHADLIQEGNVGLMKAVKRFDPE
RGVRLVSFAVHWIKAEIHEYIIRNWRLVKVATTKAQRKLFFNLRSMRPDGQTLDPEQVDH
IARELNVRREDVSEMEVRLSGRDMSLENQDDDDDSYAPIAYLSDEGRQEPTRVLERAARD
QLQSAGLTDALQALDPRSRRIVEARWLQDDGGATLHELAQEFGVSAERIRQIEAAALKKM
RGNLAS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttatcccttcgccatccggagacccccgctatgaagcaacccagtacctcgttg
gccgctaccggcaacgccctggcgttggccattgccaatccgggcgcacttggcacgatc
gacgcttatatctcctcggtcaaccgcctgccggtcttgtccgcggaacgtgaaaccgag
ctaggccgccgcctgcgcgaccaggaagacctgggcgccgcgcgcgaactgattctgtcg
cacctgcgcctggtggtgtcggtggcgcgtcagtacctgggctatggattgccgcatgcc
gacctcatccaggaaggcaacgtgggcctgatgaaggccgtcaagcgcttcgaccccgag
cgcggcgtgcgcctggtgtcgttcgccgtgcactggatcaaggccgaaattcacgagtac
atcatccgcaactggcggctggtgaaggtcgcgacgaccaaggcccagcgcaagctgttc
ttcaacctgcgcagcatgcgccccgacggccagacgctggatccggaacaggtcgaccac
atcgcgcgcgaactgaacgtgcgccgcgaagacgtgagcgaaatggaagtgcgcctgtcc
ggccgcgacatgtcgctggaaaaccaggacgatgacgatgacagctacgcgcccatcgcc
tacctgtccgacgagggccgccaggaacccacccgggtgctggaacgcgccgcccgcgac
cagctgcaaagcgccggcctgaccgacgcgctgcaagcgctggatccgcgttcgcgccgc
atcgtcgaggcccgctggctgcaggacgacggcggcgccacgctgcacgaactggcgcag
gagttcggcgtgtcggccgagcgcattcgccagatcgaagcggccgccctgaagaagatg
cgcggcaacctggcctcttga
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