Achromobacter aegrifaciens: RA224_01120
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Entry
RA224_01120 CDS
T09343
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aaeg
Achromobacter aegrifaciens
Pathway
aaeg00040
Pentose and glucuronate interconversions
aaeg01100
Metabolic pathways
aaeg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RA224_01120
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RA224_01120
Enzymes [BR:
aaeg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
RA224_01120
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
WLW62043
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Position
235699..236919
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AA seq
406 aa
AA seq
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MKAAIKTAGWLLALAMSYGGTATAAETCKSPDEHCPSVAALLQQREGYGARATGGLGGKF
IDVTSDQDSGPGTLRAALAQAKKGPTWIRFASDMTIVLDTQLRVPSNTTIDGRGRRVTLI
DDGLGVYGSKNVIFTHLTIDGRLSRLTQAVNVANNSRDVWVDHMDLSRMSDRLLNVKNGS
TDVTISWTKFHNSNKVMLLNNITSKNLYANYDRDSIARVTLHHNYFLNTVQRNPRGQFGT
FHLFNNLLEDWDFYGMSFSLEAKALVEGNIFKNSAQRKCVEPEFFPTVEGINVNYCHYIP
VAAKRSALENGESDRGAYETRKDEHGYTRDYKAFLRLKDNLYLGDAKPVLQDYRPEAAPT
PPYCYGYEKPTTELAEKIRRFAGNTGGDTPLPVSRTGSDCGGSPGQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgcaatcaaaaccgcgggctggctgcttgccctggccatgtcgtacggcggg
acggccaccgccgctgaaacgtgcaaaagcccggacgagcattgtccgtccgtcgcggcg
ctgctgcagcagcgcgagggctacggcgcccgggccacgggcggcctgggcggcaagttc
atcgacgtcacgtccgatcaggattcgggtcccggaacgctgcgcgccgcgttggcgcag
gcgaagaaaggacctacctggatacgcttcgcctccgacatgaccatcgtcctggatacg
cagctgcgcgtgccgtccaacacgacgatagacgggcgcggcaggcgcgtcaccctgatc
gacgatggcttgggcgtgtatggcagcaagaacgtcatcttcacgcacctgacgatagac
ggacgcctgtcgcggcttacgcaggccgtgaacgtggccaacaacagccgtgacgtgtgg
gtcgatcacatggatctgtcgcggatgtcggaccggctgctgaacgtgaagaacgggtcg
accgacgtcacgatctcgtggaccaagttccacaattcgaacaaggtcatgttgctcaac
aacattacgtcgaagaacctttacgccaactacgaccgcgactcgatagcgcgcgtgacg
ctgcaccacaactacttcctcaacaccgtgcagcgcaatccgcgcgggcagttcggcacc
ttccacctgttcaacaatctgctagaagattgggatttctatggcatgagtttcagcctg
gaggccaaggccctggtcgaaggcaatatcttcaagaactccgcgcagcgcaaatgcgtg
gagccggagttcttccccacggtggaaggcatcaacgtgaactattgccactacattccg
gtcgccgccaagcgcagcgcgctggagaatggcgaatccgaccgcggcgcctatgagacg
cggaaggacgaacacggttatacgcgcgattacaaggccttcctgcggctgaaggacaat
ctgtatctgggcgacgcgaagccggtgctgcaggactaccggcccgaggctgcgcctacg
ccaccgtattgctatggctatgaaaagcccacgaccgagctggcggagaagattcgcagg
ttcgcggggaatacgggcggggacacgccgttgccggtgtccaggaccgggtcggattgc
gggggatctccaggccagtag
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