Achromobacter aegrifaciens: RA224_01640
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Entry
RA224_01640 CDS
T09343
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
aaeg
Achromobacter aegrifaciens
Brite
KEGG Orthology (KO) [BR:
aaeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aaeg03000
]
RA224_01640
Transcription factors [BR:
aaeg03000
]
Prokaryotic type
Helix-turn-helix
Other families
RA224_01640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
HTH_8
Sigma54_activ_2
AAA_lid_14
HTH_30
AAA_5
Mg_chelatase
AAA_3
HTH_23
AAA_2
HTH_29
HTH_28
AAA
HTH_Tnp_1
HTH_31
HTH_1
AAA_16
Xre-like-HTH
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
WLW62142
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Position
345529..347394
Genome browser
AA seq
621 aa
AA seq
DB search
MATHSRQHALTQARLLFNQQGAVPGGMVAEPILRSWRRCADLGFDMRGVRRAELMTQGEL
REAQQRNEALRRLSEPAISLLRRQAGGSGGLVILSDAQGLVLDSDGDTGFAQRASRVALM
PGAPWDEAAAGTNAIGTALVEGRPIAVHGAEHYFEPNRILTCAAVPITDSEGRTLGVLDL
SSPARDLRPDVLELVRAAVDLIEHRLFEQAYEQHAVLRLHVDHSGLGAPGEGLLAFQGDL
LIGANRRALQALGLAPTALGVYRYADVFDGDMERCPDAAGRVQARSGAVYHARLRWPRSR
APQAPARPALPPAAGPRPAEPSFDAATLGALARAVHLSDAGVSILLQGETGVGKEVFARQ
LHARSKRACGPFVAVNCAALPESLIESELFGYEDGAFTGARRQGSKGLLRQAHGGVLFLD
EIGDMPLMLQSRLLRVLQTREVSPLGAARPVSVDFALVCATHRPLAHEGPDAPVRPDLYF
RIAEYTVTLEPLRARADRLELLRGLWAAQGAGPVLPAEIEAILAAYSWPGNYRQLAAVLR
TLHVLAGPAGVVEADMLPADIRGAASAPQAAGKDVDPANLQAMTDAAIHNALAAHGGNVS
RAARALGVHRSTLYRRLPRPA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggccactcattcccgtcagcacgcgctgacgcaagcgcgcctgctgttcaaccagcaa
ggcgcggtgcccggcggcatggtcgccgagcccatcctgcggtcgtggcgtcgctgcgcc
gacctgggcttcgacatgcgcggcgtgcgccgcgccgagctcatgacccagggcgagttg
cgcgaggcccagcagcgcaacgaggcgctgcgcaggctgtccgaacccgccatatccctg
ctgcgccgccaggccggcggcagcggcggcctggtgatcctgtccgacgcgcaaggcctg
gtgctggactccgacggcgacaccggtttcgcccagcgcgcctcgcgcgtggcgctgatg
cccggcgcgccctgggacgaagcggcggcaggcaccaacgccatcggcaccgcgctggtg
gaaggccggcccatcgccgtgcatggcgcggaacactatttcgaacccaaccgcatcctg
acctgcgccgccgtccccattaccgacagcgagggccgcacgctgggcgtgttggacctg
tccagcccggcgcgcgacctgcggcccgatgtgctggaactggtgcgcgccgccgtggac
ctgatcgagcaccgtttgtttgaacaagcctacgagcagcacgccgtgctgcggctgcat
gtggaccattccggactgggcgcgcccggcgagggcctgctggccttccagggcgacctg
ctgatcggcgccaaccgccgcgctttgcaggcgctgggcctggcgcccaccgcactgggc
gtgtaccgctacgccgacgtattcgacggcgacatggagcgctgcccggacgcggcgggc
cgggtgcaggcgcgctcgggcgccgtttaccacgcgcgtctgcgttggccgcgttcgcgc
gcgccacaggcgccggcgcggccagcgctgccgcccgcggccggcccgcgccccgccgaa
ccgagtttcgatgccgcaaccctgggcgcgctggcacgcgctgtgcacctgtcggatgcg
ggcgtgtcgattctgctgcaaggcgaaaccggcgtgggcaaggaagtgttcgcgcgccag
ctgcatgcgcgcagcaagcgcgcctgcgggccgttcgtggcggtgaactgcgcggcgttg
ccggaaagcctgatcgaatccgagctgttcggctatgaagacggcgccttcactggcgcg
aggcgccagggcagcaagggactgctgcgccaggcgcacggcggcgtgctgttcctggac
gagatcggcgacatgccgctgatgctgcaatcgcgcttgctgcgcgtgctgcagacgcgt
gaagtctcgccgctgggcgcggccagacctgtgtccgtggacttcgcgctggtgtgcgcg
acacaccggccgctggcgcacgaggggcccgacgcgccggtgcgcccggacctgtatttc
cgcatcgccgaatacaccgtcacgctggaaccgttgcgtgcacgcgccgaccgcctggag
ctgctgcgtggcctgtgggcggcgcaaggcgcaggccctgtgctgccggccgagatcgaa
gccatcctggccgcctattcatggcccggaaactaccggcaactggcggccgtgctgcgc
acattgcacgtgctggcgggacctgccggcgtcgtcgaggccgacatgctgcccgccgac
atccgcggcgcggcgtctgcgccgcaagccgcaggcaaagacgttgatcctgcgaatctg
caagccatgacggacgccgcgatccacaacgccctggccgcccatggcggcaatgtcagc
cgcgctgcgcgcgcgctgggcgtgcaccgcagcacgctttatcgccgcttgccgcgtccg
gcctag
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